Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03792

Experiment: monoculture; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 6
4,238,551	-		MIT1002_03791	0.33	-1.4
4,238,580	+		MIT1002_03791	0.35	-2.0
4,238,616	-		MIT1002_03791	0.37	-0.5
4,238,616	-		MIT1002_03791	0.37	-6.2
4,238,673	-		MIT1002_03791	0.42	-2.0
4,238,673	-		MIT1002_03791	0.42	-4.0
4,238,706	+		MIT1002_03791	0.44	-4.0
4,238,898	-		MIT1002_03791	0.58	-1.0
4,239,064	-		MIT1002_03791	0.71	-3.9
4,239,076	-		MIT1002_03791	0.72	-6.4
4,239,146	+		MIT1002_03791	0.77	-1.5
4,239,194	+		MIT1002_03791	0.80	-1.0
4,239,197	-		MIT1002_03791	0.81	-0.2
4,239,371	+				-3.8
4,239,372	+				-3.9
4,239,372	+				-5.9
4,239,374	-				-6.5
4,239,441	+				-5.5
4,239,441	+				-2.5
4,239,449	-				-2.6
4,239,454	-				-3.8
4,239,485	-				-2.4
4,239,487	+				-2.5
4,239,487	+				-0.6
4,239,495	-				-0.4
4,239,497	+				-3.9
4,239,500	-				+0.4
4,239,500	-				-2.0
4,240,067	-				+3.5
4,240,067	-				+0.2
4,240,143	+				+0.5
4,240,159	-				+0.5
4,240,193	-				-0.4
4,240,198	+				+0.1
4,240,206	-				+2.3
4,240,206	-				-2.5
4,240,206	-				-0.1
4,240,223	+				-0.9
4,240,310	-		MIT1002_03793	0.14	-2.3
4,240,399	+		MIT1002_03793	0.20	-0.3
4,240,399	+		MIT1002_03793	0.20	+0.1
4,240,407	-		MIT1002_03793	0.21	-1.3
4,240,421	+		MIT1002_03793	0.22	-0.6
4,240,560	-		MIT1002_03793	0.31	-1.6
4,240,575	-		MIT1002_03793	0.32	-0.4
4,240,579	+		MIT1002_03793	0.32	-0.6
4,240,650	-		MIT1002_03793	0.37	-1.5
4,240,658	+		MIT1002_03793	0.37	+0.5
4,240,696	+		MIT1002_03793	0.40	-3.8
4,240,696	+		MIT1002_03793	0.40	+0.1
4,240,704	-		MIT1002_03793	0.40	-0.3
4,240,704	-		MIT1002_03793	0.40	+0.9
4,240,704	-		MIT1002_03793	0.40	-1.2
4,240,704	-		MIT1002_03793	0.40	+0.0
4,240,705	+		MIT1002_03793	0.41	-0.6
4,240,710	+		MIT1002_03793	0.41	-2.5
4,240,710	+		MIT1002_03793	0.41	-1.6
4,240,713	-		MIT1002_03793	0.41	+1.5
4,240,715	+		MIT1002_03793	0.41	+0.9
4,240,718	-		MIT1002_03793	0.41	+0.3
4,240,743	-		MIT1002_03793	0.43	-0.3
4,240,764	+		MIT1002_03793	0.44	-1.9
4,240,772	-		MIT1002_03793	0.45	-1.2
4,240,801	+		MIT1002_03793	0.47	+0.3
4,240,852	+		MIT1002_03793	0.50	-1.4
4,240,852	+		MIT1002_03793	0.50	+0.5
4,240,860	+		MIT1002_03793	0.51	-1.5
4,240,860	-		MIT1002_03793	0.51	-0.3
4,240,868	-		MIT1002_03793	0.51	-0.8
4,240,876	+		MIT1002_03793	0.52	+0.1
4,240,884	+		MIT1002_03793	0.52	-1.4
4,240,884	+		MIT1002_03793	0.52	-1.0
4,240,884	+		MIT1002_03793	0.52	-0.9
4,240,884	-		MIT1002_03793	0.52	+0.3
4,240,892	-		MIT1002_03793	0.53	-2.1
4,240,892	-		MIT1002_03793	0.53	+0.8
4,240,892	-		MIT1002_03793	0.53	+0.4
4,240,927	-		MIT1002_03793	0.55	+0.9
4,240,932	+		MIT1002_03793	0.56	-0.4
4,240,960	-		MIT1002_03793	0.58	-0.2
4,240,960	-		MIT1002_03793	0.58	-1.4
4,241,001	+		MIT1002_03793	0.60	+1.3