Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03676

Experiment: monoculture; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 6
4,106,760	+		MIT1002_03674	0.56	+0.6
4,106,760	+		MIT1002_03674	0.56	+1.3
4,106,855	+		MIT1002_03674	0.65	+0.6
4,106,855	-		MIT1002_03674	0.65	+1.9
4,106,858	+		MIT1002_03674	0.66	+1.1
4,106,878	+		MIT1002_03674	0.68	-1.3
4,106,878	+		MIT1002_03674	0.68	+1.5
4,106,901	+		MIT1002_03674	0.70	+0.1
4,107,079	-		MIT1002_03674	0.88	+1.6
4,107,106	+				-0.7
4,107,109	+				+2.3
4,107,112	-				+0.1
4,107,114	-				+1.1
4,107,119	-				+1.8
4,107,119	-				+0.9
4,107,129	-				+2.2
4,107,129	-				-0.1
4,107,144	+				+0.1
4,107,152	+				+1.7
4,107,173	+				+1.5
4,107,181	-				+0.8
4,107,181	-				+0.1
4,107,205	-				+0.2
4,107,267	-		MIT1002_03675	0.18	-0.9
4,107,276	+		MIT1002_03675	0.20	-0.1
4,107,279	+		MIT1002_03675	0.20	-1.8
4,107,287	-		MIT1002_03675	0.22	-0.4
4,107,318	-		MIT1002_03675	0.29	-1.1
4,107,378	+		MIT1002_03675	0.43	-0.9
4,107,409	-		MIT1002_03675	0.50	-0.4
4,107,423	+		MIT1002_03675	0.53	-0.9
4,107,431	-		MIT1002_03675	0.55	-0.0
4,107,476	+		MIT1002_03675	0.65	+0.5
4,107,545	-		MIT1002_03675	0.81	-0.8
4,107,616	-				+1.8
4,107,745	+				-0.5
4,107,753	-				-1.2
4,107,753	-				+1.1
4,107,753	-				-0.2
4,107,817	-				-1.7
4,107,926	+		MIT1002_03676	0.20	-0.8
4,107,934	-		MIT1002_03676	0.21	-1.0
4,107,944	-		MIT1002_03676	0.22	-0.7
4,107,980	-		MIT1002_03676	0.26	+1.3
4,108,000	-		MIT1002_03676	0.28	-3.0
4,108,000	-		MIT1002_03676	0.28	-0.7
4,108,180	+		MIT1002_03676	0.48	-0.2
4,108,200	+		MIT1002_03676	0.50	-1.2
4,108,200	+		MIT1002_03676	0.50	-0.7
4,108,210	+		MIT1002_03676	0.51	+0.7
4,108,234	+		MIT1002_03676	0.54	+2.2
4,108,274	-		MIT1002_03676	0.58	+0.5
4,108,274	-		MIT1002_03676	0.58	+1.2
4,108,290	-		MIT1002_03676	0.60	+0.6
4,108,298	+		MIT1002_03676	0.61	-0.5
4,108,298	+		MIT1002_03676	0.61	+2.8
4,108,298	+		MIT1002_03676	0.61	-1.4
4,108,439	+		MIT1002_03676	0.76	-0.7
4,108,557	+		MIT1002_03676	0.89	+0.4
4,108,557	+		MIT1002_03676	0.89	+0.0
4,108,557	+		MIT1002_03676	0.89	-0.6
4,108,557	+		MIT1002_03676	0.89	+1.3
4,108,557	+		MIT1002_03676	0.89	-0.3
4,108,565	-		MIT1002_03676	0.90	-1.7
4,108,565	-		MIT1002_03676	0.90	-0.9
4,108,621	-				+1.2
4,108,673	-				-2.1
4,108,727	-				-0.9
4,108,770	+				-0.2
4,108,770	+				-0.1
4,108,770	+				-0.2
4,108,778	-				-0.2
4,108,778	-				-1.7
4,108,780	+				-1.4