Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03518

Experiment: monoculture; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 6
3,931,518	+		MIT1002_03517	0.31	-0.9
3,931,518	+		MIT1002_03517	0.31	-1.5
3,931,518	+		MIT1002_03517	0.31	+0.3
3,931,518	+		MIT1002_03517	0.31	-0.3
3,931,518	+		MIT1002_03517	0.31	+2.0
3,931,518	+		MIT1002_03517	0.31	-1.9
3,931,518	+		MIT1002_03517	0.31	-1.4
3,931,518	+		MIT1002_03517	0.31	+0.4
3,931,518	+		MIT1002_03517	0.31	+0.2
3,931,518	+		MIT1002_03517	0.31	-0.7
3,931,518	+		MIT1002_03517	0.31	+0.6
3,931,518	+		MIT1002_03517	0.31	+0.6
3,931,518	+		MIT1002_03517	0.31	+0.7
3,931,518	+		MIT1002_03517	0.31	-1.1
3,931,518	+		MIT1002_03517	0.31	+0.4
3,931,518	+		MIT1002_03517	0.31	-0.9
3,931,518	+		MIT1002_03517	0.31	+0.9
3,931,518	+		MIT1002_03517	0.31	-1.1
3,931,526	-		MIT1002_03517	0.32	-0.9
3,931,526	-		MIT1002_03517	0.32	+0.4
3,931,526	-		MIT1002_03517	0.32	-1.3
3,931,526	-		MIT1002_03517	0.32	-0.9
3,931,526	-		MIT1002_03517	0.32	-0.4
3,931,526	-		MIT1002_03517	0.32	+0.7
3,931,526	-		MIT1002_03517	0.32	-1.4
3,931,526	-		MIT1002_03517	0.32	+0.9
3,931,526	-		MIT1002_03517	0.32	-0.2
3,931,526	-		MIT1002_03517	0.32	-1.0
3,931,526	-		MIT1002_03517	0.32	+0.1
3,931,526	-		MIT1002_03517	0.32	+0.5
3,931,526	-		MIT1002_03517	0.32	+1.6
3,931,526	-		MIT1002_03517	0.32	-0.4
3,931,526	-		MIT1002_03517	0.32	-1.4
3,931,560	+		MIT1002_03517	0.35	+0.4
3,931,588	+		MIT1002_03517	0.37	-0.4
3,931,596	-		MIT1002_03517	0.38	-0.8
3,931,659	-		MIT1002_03517	0.43	-0.2
3,931,666	+		MIT1002_03517	0.44	-0.1
3,931,666	+		MIT1002_03517	0.44	-0.2
3,931,683	-		MIT1002_03517	0.46	-1.3
3,931,732	-		MIT1002_03517	0.50	-0.1
3,931,742	-		MIT1002_03517	0.51	+2.8
3,931,770	-		MIT1002_03517	0.53	+0.8
3,931,782	-		MIT1002_03517	0.54	-1.0
3,931,800	-		MIT1002_03517	0.56	-0.7
3,931,892	+		MIT1002_03517	0.63	+0.3
3,931,910	-		MIT1002_03517	0.65	-1.6
3,931,969	+		MIT1002_03517	0.70	-0.7
3,931,970	-		MIT1002_03517	0.70	-3.1
3,931,970	-		MIT1002_03517	0.70	+0.0
3,931,977	-		MIT1002_03517	0.71	-0.0
3,932,006	+		MIT1002_03517	0.73	+0.6
3,932,006	+		MIT1002_03517	0.73	+1.2
3,932,006	+		MIT1002_03517	0.73	-0.1
3,932,014	-		MIT1002_03517	0.74	-1.9
3,932,014	-		MIT1002_03517	0.74	+0.5
3,932,014	-		MIT1002_03517	0.74	-0.6
3,932,014	-		MIT1002_03517	0.74	-0.7
3,932,014	-		MIT1002_03517	0.74	-1.3
3,932,014	-		MIT1002_03517	0.74	+0.8
3,932,053	+		MIT1002_03517	0.77	-2.4
3,932,061	-		MIT1002_03517	0.78	-0.5
3,932,099	+		MIT1002_03517	0.81	-1.6
3,932,118	+		MIT1002_03517	0.83	-0.6
3,932,149	+		MIT1002_03517	0.86	-0.6
3,932,182	+		MIT1002_03517	0.88	+0.3
3,932,225	+				-0.1
3,932,346	+				-0.6
3,932,359	-				-1.2
3,932,364	-				+0.4
3,932,408	+				+0.2
3,932,411	+				+0.9
3,932,424	-				+2.3
3,932,637	+		MIT1002_03518	0.20	+0.3
3,932,637	+		MIT1002_03518	0.20	-0.9
3,932,640	-		MIT1002_03518	0.20	+1.0
3,932,645	-		MIT1002_03518	0.20	+0.2
3,932,671	+		MIT1002_03518	0.23	-2.3
3,932,738	-		MIT1002_03518	0.28	+1.8
3,932,758	-		MIT1002_03518	0.30	-1.1
3,932,767	+		MIT1002_03518	0.31	-1.8
3,932,798	+		MIT1002_03518	0.34	+0.5
3,932,803	+		MIT1002_03518	0.34	-0.4
3,932,803	+		MIT1002_03518	0.34	-0.9
3,932,811	+		MIT1002_03518	0.35	+0.2
3,932,811	-		MIT1002_03518	0.35	-0.6
3,932,811	-		MIT1002_03518	0.35	-2.9
3,932,853	-		MIT1002_03518	0.38	-1.5
3,932,861	+		MIT1002_03518	0.39	+0.3
3,932,861	+		MIT1002_03518	0.39	-0.2
3,932,869	-		MIT1002_03518	0.40	-0.0
3,932,987	-		MIT1002_03518	0.50	-0.5
3,933,033	+		MIT1002_03518	0.54	-0.7
3,933,039	+		MIT1002_03518	0.55	-0.3
3,933,047	-		MIT1002_03518	0.55	-2.7
3,933,049	+		MIT1002_03518	0.55	-0.0
3,933,049	+		MIT1002_03518	0.55	+2.1
3,933,057	-		MIT1002_03518	0.56	-1.1
3,933,076	+		MIT1002_03518	0.58	+0.1
3,933,213	+		MIT1002_03518	0.70	-0.2
3,933,214	+		MIT1002_03518	0.70	+2.1
3,933,216	-		MIT1002_03518	0.70	+0.4
3,933,224	+		MIT1002_03518	0.71	+0.5
3,933,232	-		MIT1002_03518	0.71	-3.2
3,933,238	-		MIT1002_03518	0.72	+0.5
3,933,255	-		MIT1002_03518	0.73	-0.1
3,933,274	+		MIT1002_03518	0.75	+0.8
3,933,341	+		MIT1002_03518	0.81	-1.6
3,933,346	+		MIT1002_03518	0.81	+0.3
3,933,349	-		MIT1002_03518	0.81	-0.4
3,933,351	+		MIT1002_03518	0.82	-0.3
3,933,354	-		MIT1002_03518	0.82	-3.1
3,933,450	+				+0.2
3,933,531	+				-0.7
3,933,539	-				+1.1
3,933,547	+				-1.6
3,933,631	+				-1.2
3,933,636	+				-0.2
3,933,644	-				+0.4
3,933,688	-				-2.5
3,933,694	+				-0.6
3,933,703	-				+0.3
3,933,703	-				-0.7
3,933,703	-				-0.6
3,933,723	-				-0.1
3,933,723	-				+1.3
3,933,827	-		MIT1002_03519	0.15	+0.6
3,933,849	+		MIT1002_03519	0.17	-0.8
3,933,881	+		MIT1002_03519	0.20	+1.6
3,933,888	+		MIT1002_03519	0.20	-0.6
3,933,945	-		MIT1002_03519	0.26	+0.6
3,933,945	-		MIT1002_03519	0.26	-0.5
3,933,950	+		MIT1002_03519	0.26	+0.2
3,933,969	+		MIT1002_03519	0.28	-0.0
3,934,032	-		MIT1002_03519	0.34	+1.5
3,934,119	+		MIT1002_03519	0.42	-4.3
3,934,127	-		MIT1002_03519	0.43	-2.4
3,934,132	-		MIT1002_03519	0.43	+0.4
3,934,141	+		MIT1002_03519	0.44	+0.7
3,934,149	-		MIT1002_03519	0.45	+0.1
3,934,160	+		MIT1002_03519	0.46	-2.2
3,934,168	-		MIT1002_03519	0.47	-1.0
3,934,226	+		MIT1002_03519	0.52	-1.6
3,934,282	+		MIT1002_03519	0.58	-2.8
3,934,282	+		MIT1002_03519	0.58	+0.1
3,934,282	+		MIT1002_03519	0.58	-0.0
3,934,290	-		MIT1002_03519	0.58	-0.6
3,934,290	-		MIT1002_03519	0.58	+0.9
3,934,318	+		MIT1002_03519	0.61	-0.7
3,934,326	-		MIT1002_03519	0.62	+2.5
3,934,416	+		MIT1002_03519	0.70	-0.6