Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03193

Experiment: monoculture; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 6
3,555,463	+				-1.1
3,555,522	-		MIT1002_03192	0.12	-0.7
3,555,524	+		MIT1002_03192	0.12	-2.2
3,555,524	+		MIT1002_03192	0.12	-0.3
3,555,526	+		MIT1002_03192	0.12	+0.3
3,555,532	-		MIT1002_03192	0.13	-0.3
3,555,534	-		MIT1002_03192	0.13	+0.8
3,555,534	-		MIT1002_03192	0.13	+0.5
3,555,663	+		MIT1002_03192	0.29	+1.9
3,555,684	+		MIT1002_03192	0.31	-0.6
3,555,718	+		MIT1002_03192	0.35	-0.5
3,555,906	-		MIT1002_03192	0.57	+1.1
3,555,912	+		MIT1002_03192	0.58	+1.9
3,555,917	+		MIT1002_03192	0.59	+0.2
3,555,917	+		MIT1002_03192	0.59	-1.0
3,555,927	-		MIT1002_03192	0.60	+1.0
3,555,996	-		MIT1002_03192	0.68	+1.2
3,556,035	+		MIT1002_03192	0.72	-0.7
3,556,080	+		MIT1002_03192	0.78	-0.5
3,556,109	-		MIT1002_03192	0.81	+1.2
3,556,132	-		MIT1002_03192	0.84	+0.6
3,556,154	-		MIT1002_03192	0.86	-0.1
3,556,154	-		MIT1002_03192	0.86	-0.1
3,556,170	-		MIT1002_03192	0.88	-0.3
3,556,170	-		MIT1002_03192	0.88	-1.5
3,556,173	+		MIT1002_03192	0.89	-0.7
3,556,459	+				+2.4
3,556,467	-				+0.3
3,556,636	+		MIT1002_03193	0.14	-1.6
3,556,679	+		MIT1002_03193	0.17	+0.0
3,556,679	-		MIT1002_03193	0.17	-1.3
3,556,710	+		MIT1002_03193	0.20	-0.3
3,556,717	+		MIT1002_03193	0.20	+0.2
3,556,727	+		MIT1002_03193	0.21	+1.1
3,556,732	+		MIT1002_03193	0.21	+1.2
3,556,748	+		MIT1002_03193	0.23	+0.4
3,556,777	+		MIT1002_03193	0.25	+1.3
3,556,777	+		MIT1002_03193	0.25	-0.2
3,556,785	-		MIT1002_03193	0.26	-0.4
3,556,785	-		MIT1002_03193	0.26	+1.5
3,556,916	-		MIT1002_03193	0.36	+1.2
3,556,970	-		MIT1002_03193	0.40	-0.3
3,556,975	-		MIT1002_03193	0.40	-0.7
3,556,976	+		MIT1002_03193	0.40	-0.1
3,556,981	+		MIT1002_03193	0.41	-0.2
3,556,991	+		MIT1002_03193	0.42	-0.4
3,557,018	+		MIT1002_03193	0.44	+0.1
3,557,018	+		MIT1002_03193	0.44	-1.3
3,557,026	-		MIT1002_03193	0.44	-1.3
3,557,041	+		MIT1002_03193	0.46	+1.2
3,557,047	-		MIT1002_03193	0.46	-2.5
3,557,132	-		MIT1002_03193	0.53	-2.2
3,557,133	-		MIT1002_03193	0.53	-0.4
3,557,203	-		MIT1002_03193	0.58	+0.1
3,557,326	+		MIT1002_03193	0.68	-0.1
3,557,383	+		MIT1002_03193	0.72	-1.2
3,557,384	+		MIT1002_03193	0.72	+0.2
3,557,392	-		MIT1002_03193	0.73	-0.1
3,557,410	-		MIT1002_03193	0.74	-0.2
3,557,415	-		MIT1002_03193	0.75	-1.2
3,557,420	-		MIT1002_03193	0.75	+0.9
3,557,431	+		MIT1002_03193	0.76	-0.6
3,557,573	+		MIT1002_03193	0.87	+1.1
3,557,609	+		MIT1002_03193	0.90	+1.1
3,557,635	+				+0.3
3,557,635	+				-0.6
3,557,643	-				-1.8
3,557,734	+				+0.5
3,557,757	+				+2.8
3,557,825	-				-1.1
3,557,837	+				-0.4
3,557,839	+				+0.1
3,557,890	+				+0.3
3,557,890	+				+1.3
3,557,903	-				+1.1
3,557,910	-				+1.3
3,557,929	-				+0.5
3,557,934	+				+0.8
3,557,973	-				+0.7
3,558,194	+		MIT1002_03194	0.15	-2.8
3,558,202	-		MIT1002_03194	0.15	-1.2
3,558,219	-		MIT1002_03194	0.16	+0.4
3,558,266	-		MIT1002_03194	0.18	+1.8
3,558,394	+		MIT1002_03194	0.22	-0.5
3,558,438	+		MIT1002_03194	0.24	+2.5
3,558,618	-		MIT1002_03194	0.31	-0.5
3,558,620	+		MIT1002_03194	0.31	-0.4
3,558,620	+		MIT1002_03194	0.31	+0.3
3,558,620	+		MIT1002_03194	0.31	+0.3
3,558,620	+		MIT1002_03194	0.31	-1.4
3,558,620	+		MIT1002_03194	0.31	-0.3
3,558,620	+		MIT1002_03194	0.31	-0.3
3,558,620	+		MIT1002_03194	0.31	-0.2
3,558,620	+		MIT1002_03194	0.31	-0.5
3,558,620	+		MIT1002_03194	0.31	+0.1
3,558,628	-		MIT1002_03194	0.31	+0.0
3,558,628	-		MIT1002_03194	0.31	-0.9
3,558,628	-		MIT1002_03194	0.31	-0.0
3,558,628	-		MIT1002_03194	0.31	+0.3
3,558,628	-		MIT1002_03194	0.31	+0.1
3,558,628	-		MIT1002_03194	0.31	+1.1
3,558,628	-		MIT1002_03194	0.31	-0.8
3,558,628	-		MIT1002_03194	0.31	-1.3
3,558,628	-		MIT1002_03194	0.31	+0.3
3,558,628	-		MIT1002_03194	0.31	-0.4
3,558,628	-		MIT1002_03194	0.31	-0.9
3,558,630	+		MIT1002_03194	0.31	-0.3
3,558,645	+		MIT1002_03194	0.32	+0.4
3,558,646	-		MIT1002_03194	0.32	-0.1
3,558,653	-		MIT1002_03194	0.32	-1.2
3,558,653	-		MIT1002_03194	0.32	+0.3
3,558,653	-		MIT1002_03194	0.32	-0.2
3,558,653	-		MIT1002_03194	0.32	+1.6
3,558,687	+		MIT1002_03194	0.33	-0.7
3,558,727	-		MIT1002_03194	0.35	-0.4