Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03071

Experiment: monoculture; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 6
3,424,437	+				-0.8
3,424,530	+				-0.3
3,424,603	+		MIT1002_03070	0.24	-0.4
3,424,625	+		MIT1002_03070	0.29	-0.2
3,424,733	+		MIT1002_03070	0.54	-1.4
3,424,792	+		MIT1002_03070	0.67	-0.1
3,424,802	-		MIT1002_03070	0.69	-1.3
3,424,831	+		MIT1002_03070	0.76	-0.4
3,424,831	+		MIT1002_03070	0.76	-0.8
3,424,839	-		MIT1002_03070	0.78	-0.3
3,424,839	-		MIT1002_03070	0.78	+2.3
3,424,839	-		MIT1002_03070	0.78	-0.3
3,424,862	+		MIT1002_03070	0.83	-2.9
3,425,075	+				+1.2
3,425,135	+				-1.5
3,425,155	-				-0.5
3,425,166	+				+0.0
3,425,166	+				-1.6
3,425,174	-				-0.4
3,425,174	-				-0.2
3,425,283	+				-0.4
3,425,291	-				-1.1
3,425,291	-				-0.3
3,425,396	+				+0.7
3,425,401	+				-1.6
3,425,409	-				-0.9
3,425,409	-				+0.5
3,425,435	-		MIT1002_03071	0.11	-0.1
3,425,449	+		MIT1002_03071	0.14	-1.1
3,425,526	-		MIT1002_03071	0.26	+0.6
3,425,533	+		MIT1002_03071	0.27	-0.4
3,425,661	+		MIT1002_03071	0.48	-0.5
3,425,812	-		MIT1002_03071	0.73	+0.7
3,425,895	+		MIT1002_03071	0.87	+0.4
3,425,964	+				-1.3
3,426,010	-				-0.6
3,426,064	+		MIT1002_03072	0.17	+0.1
3,426,072	-		MIT1002_03072	0.20	-0.3
3,426,072	-		MIT1002_03072	0.20	+0.8
3,426,112	+		MIT1002_03072	0.31	-1.4
3,426,167	+		MIT1002_03072	0.47	+0.2
3,426,193	+		MIT1002_03072	0.55	-0.2
3,426,239	-		MIT1002_03072	0.68	+0.9
3,426,249	+		MIT1002_03072	0.71	+0.0
3,426,267	+		MIT1002_03072	0.77	-0.0
3,426,292	+		MIT1002_03072	0.84	-2.2
3,426,300	-		MIT1002_03072	0.86	-0.2
3,426,366	-				+0.3
3,426,380	+				+1.6
3,426,380	+				-0.5
3,426,380	+				-1.4
3,426,388	-				+1.6
3,426,489	-		MIT1002_03073	0.21	+4.4
3,426,551	-		MIT1002_03073	0.30	-0.7
3,426,557	-		MIT1002_03073	0.31	+0.0
3,426,559	-		MIT1002_03073	0.31	-0.0
3,426,561	+		MIT1002_03073	0.31	+1.8
3,426,561	+		MIT1002_03073	0.31	-0.4
3,426,561	+		MIT1002_03073	0.31	+0.3
3,426,561	+		MIT1002_03073	0.31	+0.7
3,426,561	+		MIT1002_03073	0.31	+0.7
3,426,561	+		MIT1002_03073	0.31	-1.9
3,426,561	+		MIT1002_03073	0.31	-1.1
3,426,561	+		MIT1002_03073	0.31	+0.1
3,426,561	+		MIT1002_03073	0.31	-0.8
3,426,561	+		MIT1002_03073	0.31	+0.7
3,426,569	-		MIT1002_03073	0.32	-0.5
3,426,569	-		MIT1002_03073	0.32	+0.6
3,426,569	-		MIT1002_03073	0.32	-0.8
3,426,569	-		MIT1002_03073	0.32	+0.6
3,426,569	-		MIT1002_03073	0.32	+0.5
3,426,569	-		MIT1002_03073	0.32	+0.3
3,426,569	-		MIT1002_03073	0.32	-0.7
3,426,703	+		MIT1002_03073	0.51	-0.3
3,426,711	-		MIT1002_03073	0.52	-0.8
3,426,736	-		MIT1002_03073	0.55	+0.1
3,426,736	-		MIT1002_03073	0.55	-0.3
3,426,740	+		MIT1002_03073	0.56	-1.5
3,426,748	-		MIT1002_03073	0.57	-1.8
3,426,750	+		MIT1002_03073	0.57	-1.3
3,426,757	+		MIT1002_03073	0.58	+0.6
3,426,757	+		MIT1002_03073	0.58	+0.7
3,426,765	-		MIT1002_03073	0.59	-1.0
3,426,837	-		MIT1002_03073	0.69	-0.3
3,426,864	+		MIT1002_03073	0.73	-0.7