Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03037

Experiment: monoculture; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 6
3,383,724	+		MIT1002_03036	0.23	+0.5
3,383,727	+		MIT1002_03036	0.23	-0.5
3,383,764	+		MIT1002_03036	0.28	-0.8
3,383,792	+		MIT1002_03036	0.31	+0.4
3,383,792	+		MIT1002_03036	0.31	+1.6
3,383,800	-		MIT1002_03036	0.32	+0.2
3,383,801	-		MIT1002_03036	0.33	-0.7
3,383,801	-		MIT1002_03036	0.33	+1.7
3,383,838	+		MIT1002_03036	0.37	-0.8
3,383,966	-		MIT1002_03036	0.54	-2.0
3,384,019	-		MIT1002_03036	0.61	+0.8
3,384,102	+		MIT1002_03036	0.72	-0.7
3,384,113	+		MIT1002_03036	0.73	-0.8
3,384,121	-		MIT1002_03036	0.74	-0.7
3,384,121	-		MIT1002_03036	0.74	+0.2
3,384,126	-		MIT1002_03036	0.75	-1.1
3,384,129	+		MIT1002_03036	0.75	+0.2
3,384,254	-				-0.2
3,384,353	+				-0.3
3,384,410	+				+1.6
3,384,410	+				-0.9
3,384,418	-				-0.3
3,384,440	+				+1.4
3,384,478	+				+0.2
3,384,478	+				+0.1
3,384,478	+				-0.7
3,384,486	-				+0.1
3,384,486	-				-0.5
3,384,486	-				-1.2
3,384,486	-				+0.4
3,384,486	-				+0.8
3,384,568	+				+0.5
3,384,721	+				+0.8
3,384,743	-				+0.8
3,384,746	+				+0.2
3,384,746	+				-0.0
3,384,774	+				+1.4
3,384,774	+				+1.3
3,384,782	-				+0.5
3,384,783	-				-0.9
3,384,798	-				-1.7
3,384,944	+		MIT1002_03037	0.19	-1.8
3,384,952	-		MIT1002_03037	0.20	+0.0
3,384,952	-		MIT1002_03037	0.20	-0.4
3,384,954	-		MIT1002_03037	0.20	-0.6
3,384,992	+		MIT1002_03037	0.23	+0.7
3,384,992	+		MIT1002_03037	0.23	+1.1
3,384,992	+		MIT1002_03037	0.23	+0.0
3,385,196	+		MIT1002_03037	0.40	-1.0
3,385,235	-		MIT1002_03037	0.43	+2.0
3,385,292	+		MIT1002_03037	0.48	+0.5
3,385,301	-		MIT1002_03037	0.48	-0.5
3,385,341	+		MIT1002_03037	0.52	-0.2
3,385,364	-		MIT1002_03037	0.54	-0.1
3,385,425	+		MIT1002_03037	0.59	+0.5
3,385,426	-		MIT1002_03037	0.59	+1.0
3,385,578	-		MIT1002_03037	0.71	+1.2
3,385,589	+		MIT1002_03037	0.72	+1.5
3,385,589	+		MIT1002_03037	0.72	+0.3
3,385,615	-		MIT1002_03037	0.74	-0.4
3,385,617	+		MIT1002_03037	0.74	-0.2
3,385,617	+		MIT1002_03037	0.74	-2.0
3,385,660	+		MIT1002_03037	0.78	+1.2
3,385,665	+		MIT1002_03037	0.78	+1.5
3,385,668	-		MIT1002_03037	0.79	+0.6
3,385,674	-		MIT1002_03037	0.79	+3.3
3,385,688	+		MIT1002_03037	0.80	-1.7
3,385,689	+		MIT1002_03037	0.80	-0.1
3,385,751	+		MIT1002_03037	0.85	-1.0
3,385,779	+		MIT1002_03037	0.88	+0.2
3,385,817	+				-1.3
3,385,831	+				-0.5
3,385,838	+				+1.1
3,385,838	+				+0.0
3,385,846	-				-0.2
3,385,846	-				+1.3
3,385,901	+				+1.1
3,385,909	-				+0.8
3,385,909	-				-0.0
3,385,959	-				+1.0
3,385,993	+				-0.4
3,386,063	+				+1.0
3,386,073	-				+1.0
3,386,073	-				-0.6
3,386,073	-				+0.8
3,386,073	-				+0.5
3,386,073	-				-1.5
3,386,089	+				-1.9
3,386,158	-				+1.5
3,386,187	+				+0.1
3,386,187	+				+0.3
3,386,187	+				+2.2
3,386,249	+				-1.0
3,386,311	+				+0.5
3,386,314	-				-0.5
3,386,330	+				-0.9
3,386,374	-		MIT1002_03038	0.11	-0.5
3,386,374	-		MIT1002_03038	0.11	+1.8
3,386,374	-		MIT1002_03038	0.11	+0.4
3,386,380	+		MIT1002_03038	0.11	-2.6
3,386,397	-		MIT1002_03038	0.12	+0.6
3,386,414	+		MIT1002_03038	0.12	-0.3
3,386,414	+		MIT1002_03038	0.12	+0.4
3,386,422	+		MIT1002_03038	0.12	-0.7
3,386,422	-		MIT1002_03038	0.12	+2.6
3,386,422	-		MIT1002_03038	0.12	-0.2
3,386,422	-		MIT1002_03038	0.12	-1.6
3,386,422	-		MIT1002_03038	0.12	-2.0
3,386,422	-		MIT1002_03038	0.12	+2.0
3,386,422	-		MIT1002_03038	0.12	+2.0
3,386,525	-		MIT1002_03038	0.16	+2.0
3,386,562	-		MIT1002_03038	0.17	-0.9
3,386,581	-		MIT1002_03038	0.17	+1.6
3,386,590	-		MIT1002_03038	0.18	-0.4
3,386,592	+		MIT1002_03038	0.18	-0.9
3,386,640	+		MIT1002_03038	0.19	-0.6
3,386,640	+		MIT1002_03038	0.19	+1.5
3,386,642	+		MIT1002_03038	0.19	+0.0
3,386,658	+		MIT1002_03038	0.20	+0.3
3,386,692	+		MIT1002_03038	0.21	+1.1
3,386,700	-		MIT1002_03038	0.21	+1.3
3,386,785	-		MIT1002_03038	0.24	+0.2
3,386,785	-		MIT1002_03038	0.24	-1.1
3,386,793	+		MIT1002_03038	0.24	-0.8
3,386,793	+		MIT1002_03038	0.24	-1.3
3,386,891	-		MIT1002_03038	0.27	-2.0
3,386,891	-		MIT1002_03038	0.27	+0.1
3,386,923	-		MIT1002_03038	0.28	-2.0
3,386,925	+		MIT1002_03038	0.28	+1.7
3,386,925	+		MIT1002_03038	0.28	-1.0
3,386,925	+		MIT1002_03038	0.28	-0.4
3,386,927	+		MIT1002_03038	0.28	+0.0