Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02936

Experiment: monoculture; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 6
3,265,113	-				+0.0
3,265,113	-				+1.3
3,265,123	-				+0.1
3,265,131	+				+2.0
3,265,240	+		MIT1002_02935	0.16	-1.5
3,265,254	+		MIT1002_02935	0.18	+1.8
3,265,262	-		MIT1002_02935	0.19	-0.7
3,265,262	-		MIT1002_02935	0.19	-2.4
3,265,267	-		MIT1002_02935	0.19	-1.2
3,265,275	+		MIT1002_02935	0.20	-0.4
3,265,285	-		MIT1002_02935	0.21	+0.4
3,265,304	+		MIT1002_02935	0.23	-0.9
3,265,355	-		MIT1002_02935	0.28	-0.2
3,265,394	-		MIT1002_02935	0.32	+0.2
3,265,408	-		MIT1002_02935	0.33	+1.1
3,265,417	-		MIT1002_02935	0.34	+0.8
3,265,495	-		MIT1002_02935	0.42	-1.4
3,265,563	+		MIT1002_02935	0.49	+1.0
3,265,571	-		MIT1002_02935	0.50	+1.0
3,265,574	+		MIT1002_02935	0.50	+1.1
3,265,608	-		MIT1002_02935	0.54	-0.4
3,265,645	-		MIT1002_02935	0.58	-2.8
3,265,649	-		MIT1002_02935	0.58	+0.0
3,265,662	+		MIT1002_02935	0.59	-0.4
3,265,662	+		MIT1002_02935	0.59	-0.1
3,265,667	+		MIT1002_02935	0.60	+0.8
3,265,669	-		MIT1002_02935	0.60	-1.3
3,265,669	-		MIT1002_02935	0.60	+0.9
3,265,670	-		MIT1002_02935	0.60	+1.9
3,265,670	-		MIT1002_02935	0.60	-1.3
3,265,675	-		MIT1002_02935	0.61	-0.5
3,265,675	-		MIT1002_02935	0.61	+0.4
3,265,676	-		MIT1002_02935	0.61	+0.7
3,265,761	-		MIT1002_02935	0.69	+0.7
3,265,768	-		MIT1002_02935	0.70	-0.4
3,265,768	-		MIT1002_02935	0.70	+1.3
3,265,770	+		MIT1002_02935	0.70	+1.8
3,265,770	+		MIT1002_02935	0.70	-1.1
3,265,778	-		MIT1002_02935	0.71	+1.1
3,265,778	-		MIT1002_02935	0.71	-0.5
3,265,778	-		MIT1002_02935	0.71	+1.3
3,265,778	-		MIT1002_02935	0.71	+1.1
3,265,806	-		MIT1002_02935	0.74	+0.7
3,265,817	+		MIT1002_02935	0.75	-0.3
3,265,825	-		MIT1002_02935	0.76	+2.4
3,265,825	-		MIT1002_02935	0.76	+1.7
3,265,825	-		MIT1002_02935	0.76	+2.1
3,265,831	-		MIT1002_02935	0.76	+0.1
3,265,840	-		MIT1002_02935	0.77	+0.8
3,265,904	-		MIT1002_02935	0.84	-0.5
3,265,904	-		MIT1002_02935	0.84	+1.5
3,265,922	+		MIT1002_02935	0.86	+1.8
3,265,922	+		MIT1002_02935	0.86	-0.1
3,265,951	+		MIT1002_02935	0.89	-1.1
3,265,958	+		MIT1002_02935	0.89	-1.2
3,265,958	+		MIT1002_02935	0.89	-2.3
3,265,966	-				-0.9
3,266,014	+				-0.5
3,266,025	+				-0.6
3,266,025	+				+0.2
3,266,025	+				+2.3
3,266,025	+				+0.8
3,266,025	+				-0.9
3,266,033	-				+0.4
3,266,033	-				-0.3
3,266,033	-				-0.5
3,266,057	-				-1.2
3,266,115	+				+1.2
3,266,219	+		MIT1002_02936	0.18	+1.0
3,266,226	-		MIT1002_02936	0.19	-0.2
3,266,227	-		MIT1002_02936	0.19	-0.3
3,266,263	-		MIT1002_02936	0.23	+0.9
3,266,349	+		MIT1002_02936	0.33	+0.5
3,266,349	+		MIT1002_02936	0.33	-0.2
3,266,349	+		MIT1002_02936	0.33	+0.2
3,266,349	+		MIT1002_02936	0.33	-0.3
3,266,349	+		MIT1002_02936	0.33	+0.3
3,266,349	+		MIT1002_02936	0.33	-0.7
3,266,349	+		MIT1002_02936	0.33	+3.7
3,266,349	+		MIT1002_02936	0.33	+0.1
3,266,357	-		MIT1002_02936	0.34	-0.1
3,266,357	-		MIT1002_02936	0.34	+1.7
3,266,357	-		MIT1002_02936	0.34	+0.5
3,266,357	-		MIT1002_02936	0.34	+1.8
3,266,357	-		MIT1002_02936	0.34	+0.6
3,266,368	-		MIT1002_02936	0.36	-0.9
3,266,480	+		MIT1002_02936	0.48	-1.7
3,266,551	+		MIT1002_02936	0.57	+1.4
3,266,551	-		MIT1002_02936	0.57	-0.2
3,266,558	+		MIT1002_02936	0.57	+0.8
3,266,561	-		MIT1002_02936	0.58	-0.6
3,266,702	+		MIT1002_02936	0.74	+1.0
3,266,715	-		MIT1002_02936	0.75	-1.7
3,266,717	+		MIT1002_02936	0.76	-1.1
3,266,717	+		MIT1002_02936	0.76	+1.2
3,266,725	-		MIT1002_02936	0.77	-0.4
3,266,725	-		MIT1002_02936	0.77	-0.6
3,266,725	-		MIT1002_02936	0.77	+1.5
3,266,738	+		MIT1002_02936	0.78	+0.5
3,266,895	+				+0.7
3,266,901	-				+0.7
3,266,903	-				-0.3
3,266,903	-				-0.0
3,266,967	+				-1.3
3,266,987	+				-0.3
3,266,987	+				-0.2
3,266,997	-				+0.6
3,267,001	+				+0.4
3,267,001	+				-0.0
3,267,001	+				-0.0
3,267,001	+				-0.2
3,267,001	+				+0.7
3,267,001	+				-0.4
3,267,009	-				+0.9
3,267,009	-				+1.0
3,267,020	-				+1.1
3,267,020	-				-1.3
3,267,047	+				-0.0
3,267,127	+		MIT1002_02937	0.14	+1.0
3,267,127	+		MIT1002_02937	0.14	-1.2
3,267,132	+		MIT1002_02937	0.15	-0.6
3,267,135	-		MIT1002_02937	0.15	+1.5
3,267,138	-		MIT1002_02937	0.15	-0.7
3,267,157	+		MIT1002_02937	0.16	-0.4
3,267,192	-		MIT1002_02937	0.19	+1.4
3,267,192	-		MIT1002_02937	0.19	+0.9
3,267,214	+		MIT1002_02937	0.20	+1.4
3,267,222	-		MIT1002_02937	0.21	-1.7
3,267,263	+		MIT1002_02937	0.24	+1.1
3,267,272	+		MIT1002_02937	0.25	+1.4
3,267,272	+		MIT1002_02937	0.25	-1.0
3,267,280	-		MIT1002_02937	0.25	-0.2
3,267,291	+		MIT1002_02937	0.26	+0.2
3,267,299	-		MIT1002_02937	0.26	-0.2
3,267,299	-		MIT1002_02937	0.26	+0.4
3,267,299	-		MIT1002_02937	0.26	+0.3
3,267,299	-		MIT1002_02937	0.26	+1.5
3,267,346	-		MIT1002_02937	0.30	-0.1
3,267,355	+		MIT1002_02937	0.30	-0.0
3,267,363	-		MIT1002_02937	0.31	+0.4
3,267,386	-		MIT1002_02937	0.33	+1.8
3,267,398	-		MIT1002_02937	0.33	-1.4
3,267,420	+		MIT1002_02937	0.35	-0.2
3,267,471	+		MIT1002_02937	0.39	-2.5
3,267,518	+		MIT1002_02937	0.42	+0.6
3,267,519	-		MIT1002_02937	0.42	+0.9
3,267,561	+		MIT1002_02937	0.45	-0.9
3,267,618	+		MIT1002_02937	0.49	-0.1
3,267,631	-		MIT1002_02937	0.50	+1.4
3,267,631	-		MIT1002_02937	0.50	-1.0
3,267,631	-		MIT1002_02937	0.50	-0.8
3,267,669	+		MIT1002_02937	0.53	+0.2
3,267,706	+		MIT1002_02937	0.55	+1.3
3,267,706	+		MIT1002_02937	0.55	-0.8
3,267,706	+		MIT1002_02937	0.55	-0.6
3,267,706	+		MIT1002_02937	0.55	-0.2
3,267,714	-		MIT1002_02937	0.56	+0.0
3,267,714	-		MIT1002_02937	0.56	+1.0
3,267,714	-		MIT1002_02937	0.56	+0.3
3,267,817	-		MIT1002_02937	0.63	-0.7
3,267,864	+		MIT1002_02937	0.66	+1.0
3,267,919	+		MIT1002_02937	0.70	+1.0
3,267,927	-		MIT1002_02937	0.71	-1.2