Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02919

Experiment: monoculture; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 6
3,242,852	+		MIT1002_02918	0.17	-0.3
3,242,865	-		MIT1002_02918	0.19	-1.0
3,242,904	-		MIT1002_02918	0.24	-0.4
3,242,904	-		MIT1002_02918	0.24	+0.4
3,242,964	+		MIT1002_02918	0.31	-0.6
3,242,966	-		MIT1002_02918	0.32	-0.4
3,242,977	+		MIT1002_02918	0.33	-0.8
3,242,985	-		MIT1002_02918	0.34	-0.7
3,242,990	+		MIT1002_02918	0.35	-0.1
3,242,992	-		MIT1002_02918	0.35	+0.7
3,242,995	+		MIT1002_02918	0.35	+0.8
3,243,003	-		MIT1002_02918	0.36	+0.5
3,243,051	+		MIT1002_02918	0.42	+2.4
3,243,081	+		MIT1002_02918	0.46	+0.6
3,243,089	-		MIT1002_02918	0.47	-0.4
3,243,208	+		MIT1002_02918	0.62	-1.5
3,243,216	-		MIT1002_02918	0.63	-0.2
3,243,240	+		MIT1002_02918	0.66	-1.6
3,243,240	+		MIT1002_02918	0.66	+3.0
3,243,240	+		MIT1002_02918	0.66	-1.4
3,243,240	+		MIT1002_02918	0.66	+0.4
3,243,245	+		MIT1002_02918	0.66	+0.9
3,243,248	-		MIT1002_02918	0.67	-0.2
3,243,253	-		MIT1002_02918	0.67	+0.4
3,243,257	-		MIT1002_02918	0.68	+0.6
3,243,334	+		MIT1002_02918	0.78	-1.0
3,243,335	+		MIT1002_02918	0.78	+0.6
3,243,335	+		MIT1002_02918	0.78	-1.7
3,243,343	-		MIT1002_02918	0.79	-0.5
3,243,350	-		MIT1002_02918	0.80	-1.7
3,243,350	-		MIT1002_02918	0.80	+0.4
3,243,352	+		MIT1002_02918	0.80	+0.6
3,243,360	-		MIT1002_02918	0.81	-0.4
3,243,361	+		MIT1002_02918	0.81	-0.5
3,243,678	+				+0.7
3,243,704	-				-0.1
3,243,804	-				+0.9
3,243,881	-				-0.6
3,243,884	+				-2.2
3,243,943	-		MIT1002_02919	0.11	-0.7
3,243,956	-		MIT1002_02919	0.11	+1.3
3,243,961	-		MIT1002_02919	0.12	-1.0
3,243,987	+		MIT1002_02919	0.13	-0.3
3,244,057	-		MIT1002_02919	0.17	-1.4
3,244,086	-		MIT1002_02919	0.19	-1.0
3,244,124	+		MIT1002_02919	0.21	+0.4
3,244,125	+		MIT1002_02919	0.22	+0.1
3,244,133	-		MIT1002_02919	0.22	-2.4
3,244,133	-		MIT1002_02919	0.22	-1.0
3,244,135	+		MIT1002_02919	0.22	-0.2
3,244,135	+		MIT1002_02919	0.22	+0.5
3,244,143	-		MIT1002_02919	0.23	+0.0
3,244,143	-		MIT1002_02919	0.23	-0.4
3,244,193	-		MIT1002_02919	0.26	+0.1
3,244,237	+		MIT1002_02919	0.28	+0.8
3,244,264	-		MIT1002_02919	0.30	+3.5
3,244,346	+		MIT1002_02919	0.35	-0.1
3,244,432	+		MIT1002_02919	0.40	+0.7
3,244,467	+		MIT1002_02919	0.42	+0.5
3,244,477	+		MIT1002_02919	0.42	+1.1
3,244,514	+		MIT1002_02919	0.45	-1.9
3,244,577	-		MIT1002_02919	0.48	+1.2
3,244,639	-		MIT1002_02919	0.52	-1.7
3,244,639	-		MIT1002_02919	0.52	-1.4
3,244,672	+		MIT1002_02919	0.54	-0.7
3,244,672	+		MIT1002_02919	0.54	-1.2
3,244,680	-		MIT1002_02919	0.54	+0.7
3,244,702	-		MIT1002_02919	0.56	+0.0
3,244,734	-		MIT1002_02919	0.58	+1.3
3,244,741	+		MIT1002_02919	0.58	-0.4
3,244,742	-		MIT1002_02919	0.58	+0.7
3,244,811	+		MIT1002_02919	0.62	-0.1
3,244,828	+		MIT1002_02919	0.63	-1.8
3,244,829	+		MIT1002_02919	0.63	+1.1
3,244,966	+		MIT1002_02919	0.71	-1.8
3,244,966	+		MIT1002_02919	0.71	-0.7
3,244,974	-		MIT1002_02919	0.72	-0.4
3,244,974	-		MIT1002_02919	0.72	+0.7
3,245,015	-		MIT1002_02919	0.74	+1.3
3,245,130	-		MIT1002_02919	0.81	-1.4
3,245,144	-		MIT1002_02919	0.82	+1.0
3,245,331	-				-0.7
3,245,387	+				+0.6
3,245,395	-				-0.8
3,245,395	-				+0.4
3,245,686	+				-0.6
3,245,702	-				-0.8
3,245,838	+		MIT1002_02920	0.14	-1.6
3,245,901	-		MIT1002_02920	0.25	+1.0
3,245,963	-		MIT1002_02920	0.36	-0.1
3,245,963	-		MIT1002_02920	0.36	-1.0
3,245,987	-		MIT1002_02920	0.41	+0.9
3,245,987	-		MIT1002_02920	0.41	+2.4
3,246,005	+		MIT1002_02920	0.44	+1.3
3,246,040	+		MIT1002_02920	0.50	-1.1
3,246,061	-		MIT1002_02920	0.54	-0.7
3,246,074	-		MIT1002_02920	0.57	-1.1
3,246,111	-		MIT1002_02920	0.63	+0.3
3,246,112	+		MIT1002_02920	0.63	-1.4
3,246,176	+		MIT1002_02920	0.75	+0.2
3,246,183	+		MIT1002_02920	0.76	-0.5
3,246,203	+		MIT1002_02920	0.80	+1.4
3,246,231	+		MIT1002_02920	0.85	+0.5
3,246,275	+				-1.6
3,246,350	+				+0.5
3,246,350	+				+2.7
3,246,350	+				+0.1
3,246,350	+				-0.0
3,246,350	+				+0.9
3,246,350	+				-0.1
3,246,350	+				+0.0
3,246,350	+				-0.3
3,246,350	+				+1.0
3,246,350	+				+1.2
3,246,350	+				+1.0
3,246,350	+				-0.8
3,246,350	+				-0.1
3,246,350	+				-1.3
3,246,350	+				+0.3
3,246,350	+				+1.2
3,246,350	+				-0.8
3,246,350	+				+0.0
3,246,350	+				+1.7
3,246,350	+				+2.4
3,246,353	-				-0.4
3,246,358	-				+0.8
3,246,358	-				+0.5
3,246,358	-				-0.8
3,246,358	-				+0.4
3,246,358	-				-0.6
3,246,358	-				-0.8
3,246,358	-				+1.0
3,246,358	-				+0.6
3,246,358	-				+0.1
3,246,358	-				+0.5
3,246,358	-				-2.7
3,246,358	-				-2.3
3,246,358	-				+1.6
3,246,358	-				-0.3
3,246,358	-				-0.0
3,246,358	-				-1.3
3,246,360	-				-0.4
3,246,360	-				+0.5
3,246,360	-				+0.1
3,246,438	+		MIT1002_02921	0.10	-0.4
3,246,438	+		MIT1002_02921	0.10	+0.3
3,246,438	-		MIT1002_02921	0.10	+2.4