Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02845

Experiment: monoculture; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 6
3,155,191	+		MIT1002_02844	0.67	-0.7
3,155,194	+		MIT1002_02844	0.68	+1.1
3,155,241	+		MIT1002_02844	0.69	+0.7
3,155,283	+		MIT1002_02844	0.71	+1.1
3,155,431	+		MIT1002_02844	0.76	-3.2
3,155,431	+		MIT1002_02844	0.76	-0.5
3,155,439	-		MIT1002_02844	0.77	+2.8
3,155,439	-		MIT1002_02844	0.77	-1.7
3,155,439	-		MIT1002_02844	0.77	-0.3
3,155,448	+		MIT1002_02844	0.77	+0.3
3,155,452	+		MIT1002_02844	0.77	-0.4
3,155,456	-		MIT1002_02844	0.77	-0.0
3,155,456	-		MIT1002_02844	0.77	+1.8
3,155,462	-		MIT1002_02844	0.77	-0.4
3,155,467	+		MIT1002_02844	0.78	-0.2
3,155,565	-		MIT1002_02844	0.81	+0.9
3,155,604	-		MIT1002_02844	0.83	+1.1
3,155,614	-		MIT1002_02844	0.83	+0.3
3,155,665	-		MIT1002_02844	0.85	+0.8
3,155,706	+		MIT1002_02844	0.86	-3.2
3,155,869	+				-1.2
3,155,905	+				+0.1
3,155,905	+				-0.6
3,155,905	+				-0.5
3,155,910	+				-0.8
3,155,913	-				-2.0
3,155,913	-				-0.7
3,155,944	+				-1.2
3,155,977	-				-0.5
3,156,001	-				-0.1
3,156,013	-				-1.4
3,156,043	+				-0.1
3,156,058	+				-1.3
3,156,064	+				-1.0
3,156,082	-				-2.4
3,156,092	-				-0.1
3,156,165	+				+1.4
3,156,271	+				+0.5
3,156,350	+		MIT1002_02845	0.16	-0.1
3,156,350	+		MIT1002_02845	0.16	-0.3
3,156,350	+		MIT1002_02845	0.16	+0.6
3,156,358	-		MIT1002_02845	0.17	-0.2
3,156,358	-		MIT1002_02845	0.17	-0.3
3,156,360	+		MIT1002_02845	0.17	-0.9
3,156,360	+		MIT1002_02845	0.17	-0.9
3,156,368	-		MIT1002_02845	0.18	+0.3
3,156,368	-		MIT1002_02845	0.18	-0.5
3,156,368	-		MIT1002_02845	0.18	+0.4
3,156,368	-		MIT1002_02845	0.18	+1.2
3,156,399	-		MIT1002_02845	0.21	-1.8
3,156,415	+		MIT1002_02845	0.22	+0.1
3,156,415	+		MIT1002_02845	0.22	-0.7
3,156,415	+		MIT1002_02845	0.22	+1.1
3,156,423	-		MIT1002_02845	0.23	-0.8
3,156,425	+		MIT1002_02845	0.23	+0.2
3,156,425	+		MIT1002_02845	0.23	-2.2
3,156,425	+		MIT1002_02845	0.23	-0.0
3,156,425	+		MIT1002_02845	0.23	+0.1
3,156,433	-		MIT1002_02845	0.24	-0.6
3,156,433	-		MIT1002_02845	0.24	-0.1
3,156,433	-		MIT1002_02845	0.24	-0.9
3,156,433	-		MIT1002_02845	0.24	-0.1
3,156,433	-		MIT1002_02845	0.24	-0.8
3,156,433	-		MIT1002_02845	0.24	+1.2
3,156,435	+		MIT1002_02845	0.24	+0.3
3,156,442	+		MIT1002_02845	0.25	-0.3
3,156,459	+		MIT1002_02845	0.26	+0.4
3,156,543	+		MIT1002_02845	0.34	-1.5
3,156,608	-		MIT1002_02845	0.40	+0.4
3,156,625	-		MIT1002_02845	0.42	-1.4
3,156,635	+		MIT1002_02845	0.43	-1.1
3,156,668	+		MIT1002_02845	0.46	+0.2
3,156,716	+		MIT1002_02845	0.51	-0.0
3,156,739	+		MIT1002_02845	0.53	-1.0
3,156,739	+		MIT1002_02845	0.53	+0.4
3,156,747	-		MIT1002_02845	0.54	-0.3
3,156,764	+		MIT1002_02845	0.55	-0.2
3,156,764	+		MIT1002_02845	0.55	-0.5
3,156,772	-		MIT1002_02845	0.56	+0.1
3,156,793	+		MIT1002_02845	0.58	+2.4
3,156,840	-		MIT1002_02845	0.62	-1.0
3,156,963	-		MIT1002_02845	0.74	+0.6
3,156,969	+		MIT1002_02845	0.74	+2.0
3,157,040	+		MIT1002_02845	0.81	-0.3
3,157,057	+		MIT1002_02845	0.83	+1.0
3,157,057	+		MIT1002_02845	0.83	-1.7
3,157,065	-		MIT1002_02845	0.84	-1.2
3,157,082	+		MIT1002_02845	0.85	-0.4
3,157,090	-		MIT1002_02845	0.86	+0.7
3,157,090	-		MIT1002_02845	0.86	+1.0
3,157,119	+		MIT1002_02845	0.89	-0.6
3,157,119	+		MIT1002_02845	0.89	-1.6
3,157,158	-				-0.3
3,157,258	-				+1.0
3,157,278	+				-2.3
3,157,402	+		MIT1002_02846	0.29	-0.5
3,157,466	-		MIT1002_02846	0.40	-0.7
3,157,469	+		MIT1002_02846	0.40	+1.7
3,157,477	-		MIT1002_02846	0.42	-1.0
3,157,536	-		MIT1002_02846	0.52	-0.6
3,157,544	+		MIT1002_02846	0.53	-1.5
3,157,544	+		MIT1002_02846	0.53	+0.8
3,157,549	-		MIT1002_02846	0.54	-0.6
3,157,552	-		MIT1002_02846	0.55	-0.3
3,157,552	-		MIT1002_02846	0.55	-1.2
3,157,552	-		MIT1002_02846	0.55	+0.5
3,157,570	+		MIT1002_02846	0.58	-0.6
3,157,617	+		MIT1002_02846	0.66	+1.1
3,157,690	-		MIT1002_02846	0.78	+0.4
3,157,776	-				+0.4
3,157,776	-				+0.2
3,157,856	-				-1.8
3,157,856	-				+0.2
3,157,875	+				-1.0
3,157,893	+				+0.4
3,157,898	+				+0.0
3,157,959	+		MIT1002_02847	0.12	-1.1
3,158,015	-		MIT1002_02847	0.17	-0.9
3,158,050	-		MIT1002_02847	0.19	-0.2
3,158,065	+		MIT1002_02847	0.21	-0.9
3,158,080	+		MIT1002_02847	0.22	-0.9
3,158,080	+		MIT1002_02847	0.22	+1.8
3,158,088	-		MIT1002_02847	0.23	+0.4
3,158,088	-		MIT1002_02847	0.23	+0.3
3,158,117	-		MIT1002_02847	0.25	-0.4
3,158,167	-		MIT1002_02847	0.29	+0.7
3,158,168	-		MIT1002_02847	0.29	+3.4
3,158,175	+		MIT1002_02847	0.30	+1.1
3,158,213	-		MIT1002_02847	0.33	-0.4