Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02582

Experiment: monoculture; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 6
2,883,086	+		MIT1002_02580	0.72	+0.9
2,883,096	-		MIT1002_02580	0.73	+0.9
2,883,152	-		MIT1002_02580	0.76	-0.4
2,883,181	+		MIT1002_02580	0.78	-2.5
2,883,181	+		MIT1002_02580	0.78	+0.1
2,883,189	-		MIT1002_02580	0.78	-3.0
2,883,222	+		MIT1002_02580	0.81	-1.0
2,883,282	-		MIT1002_02580	0.84	+0.9
2,883,282	-		MIT1002_02580	0.84	-4.1
2,883,329	+		MIT1002_02580	0.87	-0.9
2,883,494	-				-0.1
2,883,496	+				-1.8
2,883,496	+				-1.8
2,883,504	-				-1.5
2,883,551	+				+0.6
2,883,650	+		MIT1002_02581	0.22	-0.4
2,883,650	+		MIT1002_02581	0.22	-2.5
2,883,650	+		MIT1002_02581	0.22	+0.6
2,883,650	+		MIT1002_02581	0.22	+0.6
2,883,674	+		MIT1002_02581	0.27	+0.9
2,883,784	+		MIT1002_02581	0.48	-2.2
2,883,822	+		MIT1002_02581	0.55	-0.4
2,883,910	+		MIT1002_02581	0.72	-1.5
2,884,001	+		MIT1002_02581	0.89	+0.1
2,884,009	+				-1.2
2,884,107	-				+0.1
2,884,117	+		MIT1002_02582	0.11	+1.4
2,884,155	-		MIT1002_02582	0.18	-1.6
2,884,175	-		MIT1002_02582	0.21	-0.3
2,884,187	+		MIT1002_02582	0.24	-2.4
2,884,219	-		MIT1002_02582	0.29	-0.4
2,884,235	+		MIT1002_02582	0.32	-1.7
2,884,242	-		MIT1002_02582	0.34	+0.2
2,884,242	-		MIT1002_02582	0.34	+0.1
2,884,284	+		MIT1002_02582	0.41	-0.8
2,884,293	-		MIT1002_02582	0.43	-1.1
2,884,331	-		MIT1002_02582	0.50	-1.2
2,884,331	-		MIT1002_02582	0.50	-2.0
2,884,331	-		MIT1002_02582	0.50	-1.6
2,884,387	+		MIT1002_02582	0.60	+0.2
2,884,395	-		MIT1002_02582	0.61	+0.3
2,884,395	-		MIT1002_02582	0.61	-1.0
2,884,395	-		MIT1002_02582	0.61	-2.9
2,884,407	+		MIT1002_02582	0.63	+3.2
2,884,449	-		MIT1002_02582	0.71	+0.2
2,884,471	+		MIT1002_02582	0.75	-1.2
2,884,480	+		MIT1002_02582	0.76	+1.7
2,884,488	-		MIT1002_02582	0.78	+0.4
2,884,488	-		MIT1002_02582	0.78	-0.6
2,884,488	-		MIT1002_02582	0.78	-1.4
2,884,521	-		MIT1002_02582	0.84	+1.5
2,884,542	-		MIT1002_02582	0.88	+0.0
2,884,578	+				+0.7
2,884,586	-				+0.7
2,884,636	-				-0.0
2,884,723	-		MIT1002_02583	0.20	-2.8
2,884,751	-		MIT1002_02583	0.25	-0.7
2,884,751	-		MIT1002_02583	0.25	+1.7
2,884,997	+		MIT1002_02583	0.75	-0.9
2,885,005	-		MIT1002_02583	0.77	-1.8
2,885,053	-		MIT1002_02583	0.86	-1.0
2,885,290	+		MIT1002_02584	0.26	+0.2
2,885,398	+		MIT1002_02584	0.42	+0.6
2,885,464	-		MIT1002_02584	0.52	-2.4
2,885,481	-		MIT1002_02584	0.54	-1.3
2,885,499	-		MIT1002_02584	0.57	+1.5
2,885,557	+		MIT1002_02584	0.66	+0.5
2,885,557	+		MIT1002_02584	0.66	+1.6
2,885,575	+		MIT1002_02584	0.68	-0.7
2,885,582	+		MIT1002_02584	0.70	+0.9
2,885,590	-		MIT1002_02584	0.71	+0.6