Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02539

Experiment: monoculture; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 6
2,833,135	-		MIT1002_02538	0.59	+0.1
2,833,209	+		MIT1002_02538	0.65	-1.1
2,833,233	+		MIT1002_02538	0.67	-0.8
2,833,688	+				-0.4
2,833,696	-				+0.1
2,833,698	+				+0.4
2,833,759	-				+0.4
2,833,831	+				-0.8
2,833,865	+				-2.1
2,833,867	+				+0.9
2,833,867	+				-0.6
2,833,875	-				+1.4
2,833,875	-				+0.5
2,833,875	-				+0.0
2,833,875	-				+0.5
2,833,875	-				+0.3
2,833,875	-				+0.8
2,833,912	+				-1.1
2,833,985	+				-0.2
2,833,993	-				+0.5
2,834,019	+				-0.3
2,834,064	+		MIT1002_02539	0.13	-0.1
2,834,090	+		MIT1002_02539	0.15	+0.7
2,834,090	+		MIT1002_02539	0.15	+0.3
2,834,090	+		MIT1002_02539	0.15	+0.9
2,834,098	-		MIT1002_02539	0.16	-0.5
2,834,217	+		MIT1002_02539	0.27	-1.5
2,834,319	-		MIT1002_02539	0.37	+0.2
2,834,329	+		MIT1002_02539	0.38	+1.2
2,834,410	+		MIT1002_02539	0.45	+1.2
2,834,476	+		MIT1002_02539	0.52	-0.4
2,834,529	+		MIT1002_02539	0.57	-1.0
2,834,545	+		MIT1002_02539	0.58	-0.4
2,834,593	-		MIT1002_02539	0.63	+0.3
2,834,601	-		MIT1002_02539	0.64	+0.1
2,834,601	-		MIT1002_02539	0.64	-0.9
2,834,685	-		MIT1002_02539	0.72	-0.0
2,834,727	-		MIT1002_02539	0.76	-0.4
2,834,728	+		MIT1002_02539	0.76	-1.0
2,834,751	+		MIT1002_02539	0.78	+1.7
2,834,765	+		MIT1002_02539	0.79	-0.6
2,834,790	+		MIT1002_02539	0.82	-0.8
2,834,793	-		MIT1002_02539	0.82	+0.6
2,834,793	-		MIT1002_02539	0.82	-1.1
2,834,800	+		MIT1002_02539	0.83	+0.9
2,834,809	+		MIT1002_02539	0.83	-0.4
2,834,812	+		MIT1002_02539	0.84	-1.2
2,834,822	+		MIT1002_02539	0.85	-0.5
2,834,859	+		MIT1002_02539	0.88	+0.5
2,834,859	+		MIT1002_02539	0.88	-1.0
2,834,877	+		MIT1002_02539	0.90	-2.0
2,834,924	+				+0.1
2,834,985	+				+0.2
2,835,041	-				+0.1
2,835,144	-		MIT1002_02540	0.20	-0.5
2,835,162	-		MIT1002_02540	0.24	-1.1
2,835,200	-		MIT1002_02540	0.32	+0.9
2,835,403	+		MIT1002_02540	0.79	-0.5
2,835,518	-				-0.3
2,835,518	-				-0.8
2,835,629	-				-0.4
2,835,731	+				+0.3
2,835,744	+				-0.1
2,835,744	+				-0.5
2,835,770	+				-1.3
2,835,830	-				-0.0
2,835,860	+		MIT1002_02541	0.11	-0.1
2,835,945	+		MIT1002_02541	0.18	+0.3
2,835,978	-		MIT1002_02541	0.20	+2.1