Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02468

Experiment: monoculture; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 6
2,759,573	-		MIT1002_02466	0.43	-0.7
2,759,631	+		MIT1002_02466	0.48	+1.5
2,759,655	+		MIT1002_02466	0.49	+0.5
2,759,662	+		MIT1002_02466	0.50	+0.7
2,759,667	+		MIT1002_02466	0.50	+0.3
2,759,670	-		MIT1002_02466	0.51	+2.1
2,759,757	-		MIT1002_02466	0.57	-0.2
2,759,757	-		MIT1002_02466	0.57	+0.9
2,759,782	+		MIT1002_02466	0.59	-0.6
2,759,802	+		MIT1002_02466	0.60	-2.1
2,759,802	+		MIT1002_02466	0.60	+0.4
2,759,810	-		MIT1002_02466	0.61	-0.0
2,759,853	+		MIT1002_02466	0.64	-0.3
2,759,907	+		MIT1002_02466	0.68	+0.8
2,759,956	+		MIT1002_02466	0.72	-0.3
2,759,959	-		MIT1002_02466	0.72	-1.8
2,759,964	-		MIT1002_02466	0.72	-0.7
2,759,986	+		MIT1002_02466	0.74	-0.3
2,760,148	+		MIT1002_02466	0.86	-0.0
2,760,154	-		MIT1002_02466	0.86	-0.2
2,760,156	-		MIT1002_02466	0.86	-0.3
2,760,185	+		MIT1002_02466	0.89	-1.7
2,760,185	+		MIT1002_02466	0.89	-1.4
2,760,214	+				+0.7
2,760,217	-				-2.5
2,760,222	-				+2.5
2,760,222	-				-1.3
2,760,222	-				-0.2
2,760,222	-				-0.1
2,760,252	-				-2.1
2,760,297	-				-2.3
2,760,332	+				+0.1
2,760,360	+				-0.2
2,760,360	+				+0.9
2,760,360	+				-0.1
2,760,360	+				+1.0
2,760,360	+				+0.5
2,760,360	+				-1.2
2,760,360	+				-0.1
2,760,360	+				+1.6
2,760,368	-				-0.1
2,760,368	-				-1.3
2,760,368	-				+1.6
2,760,416	+				+1.4
2,760,439	+				-0.8
2,760,507	+		MIT1002_02467	0.20	-0.2
2,760,562	+		MIT1002_02467	0.64	+0.9
2,760,588	-				+0.7
2,760,590	+				-1.8
2,760,590	+				+3.2
2,760,598	-				+1.3
2,760,598	-				-1.3
2,760,598	-				-1.1
2,760,598	-				+1.1
2,760,623	+		MIT1002_02468	0.19	-0.0
2,760,631	-		MIT1002_02468	0.22	+1.3
2,760,661	-		MIT1002_02468	0.34	-1.3
2,760,677	-		MIT1002_02468	0.40	-2.8
2,760,703	-		MIT1002_02468	0.49	+0.4
2,760,832	+				-1.1
2,760,880	-				+2.0
2,760,970	-				+0.3
2,760,970	-				-2.5
2,761,033	-		MIT1002_02469	0.14	+1.9
2,761,153	+		MIT1002_02469	0.28	-0.6
2,761,153	+		MIT1002_02469	0.28	+3.0
2,761,153	+		MIT1002_02469	0.28	-0.8
2,761,161	-		MIT1002_02469	0.29	-2.0
2,761,161	-		MIT1002_02469	0.29	+2.4
2,761,161	-		MIT1002_02469	0.29	+0.6
2,761,161	-		MIT1002_02469	0.29	-1.4
2,761,161	-		MIT1002_02469	0.29	-0.9
2,761,166	-		MIT1002_02469	0.30	+1.0
2,761,166	-		MIT1002_02469	0.30	-0.7
2,761,166	-		MIT1002_02469	0.30	+1.2
2,761,166	-		MIT1002_02469	0.30	+0.7
2,761,245	-		MIT1002_02469	0.40	-0.3
2,761,289	+		MIT1002_02469	0.45	-0.1
2,761,289	+		MIT1002_02469	0.45	+0.1
2,761,291	-		MIT1002_02469	0.45	+2.2
2,761,292	-		MIT1002_02469	0.46	-1.5
2,761,336	-		MIT1002_02469	0.51	-0.9
2,761,356	-		MIT1002_02469	0.53	-1.7
2,761,366	+		MIT1002_02469	0.55	-1.3
2,761,369	-		MIT1002_02469	0.55	-0.4
2,761,440	-		MIT1002_02469	0.64	+0.2
2,761,631	+		MIT1002_02469	0.87	+0.9
2,761,742	+				-2.9
2,761,742	+				+0.5
2,761,747	+				+0.7
2,761,759	-				+0.2
2,761,766	+				+1.5
2,761,766	+				-0.2