Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02448

Experiment: monoculture; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 6
2,731,176	-		MIT1002_02447	0.28	-0.9
2,731,183	+		MIT1002_02447	0.29	-1.5
2,731,258	+		MIT1002_02447	0.35	-1.0
2,731,266	-		MIT1002_02447	0.36	-0.9
2,731,270	+		MIT1002_02447	0.36	+1.1
2,731,278	-		MIT1002_02447	0.37	-2.8
2,731,278	-		MIT1002_02447	0.37	+0.3
2,731,282	+		MIT1002_02447	0.37	-1.2
2,731,290	-		MIT1002_02447	0.38	-1.8
2,731,290	-		MIT1002_02447	0.38	-0.3
2,731,290	-		MIT1002_02447	0.38	-0.5
2,731,318	+		MIT1002_02447	0.40	-1.8
2,731,354	-		MIT1002_02447	0.43	-0.2
2,731,354	-		MIT1002_02447	0.43	-0.7
2,731,374	-		MIT1002_02447	0.45	+0.9
2,731,414	-		MIT1002_02447	0.48	+2.4
2,731,492	-		MIT1002_02447	0.55	+0.2
2,731,494	+		MIT1002_02447	0.55	+1.9
2,731,623	-		MIT1002_02447	0.66	+1.6
2,731,667	-		MIT1002_02447	0.69	-0.2
2,731,686	-		MIT1002_02447	0.71	-2.6
2,731,757	+		MIT1002_02447	0.77	+0.5
2,731,774	+		MIT1002_02447	0.78	-2.1
2,731,782	-		MIT1002_02447	0.79	+0.4
2,731,788	+		MIT1002_02447	0.79	-1.0
2,731,836	+		MIT1002_02447	0.83	+2.1
2,731,910	+		MIT1002_02447	0.89	+3.7
2,731,957	+				-0.2
2,731,985	-				-0.2
2,731,995	+				-2.1
2,731,995	+				-0.2
2,731,995	+				+0.3
2,732,003	-				-0.4
2,732,003	-				-0.8
2,732,003	-				-1.7
2,732,003	-				-0.8
2,732,067	+				-1.5
2,732,073	-				+0.5
2,732,128	-				+0.7
2,732,152	+				+0.6
2,732,154	+				+1.2
2,732,192	-				+1.5
2,732,260	+		MIT1002_02448	0.13	+1.7
2,732,268	+		MIT1002_02448	0.14	-1.7
2,732,269	-		MIT1002_02448	0.14	-0.8
2,732,276	-		MIT1002_02448	0.14	-0.0
2,732,283	+		MIT1002_02448	0.15	-1.3
2,732,357	+		MIT1002_02448	0.20	-0.3
2,732,363	+		MIT1002_02448	0.20	+1.5
2,732,363	+		MIT1002_02448	0.20	-1.5
2,732,371	-		MIT1002_02448	0.21	-0.6
2,732,443	-		MIT1002_02448	0.25	-1.8
2,732,517	+		MIT1002_02448	0.30	-1.2
2,732,518	+		MIT1002_02448	0.31	-0.1
2,732,525	+		MIT1002_02448	0.31	-0.7
2,732,525	+		MIT1002_02448	0.31	+0.7
2,732,525	+		MIT1002_02448	0.31	-0.3
2,732,533	-		MIT1002_02448	0.32	-2.6
2,732,547	-		MIT1002_02448	0.33	+0.5
2,732,603	-		MIT1002_02448	0.36	-0.1
2,732,607	+		MIT1002_02448	0.37	+0.2
2,732,609	-		MIT1002_02448	0.37	-0.6
2,732,616	-		MIT1002_02448	0.37	+1.1
2,732,656	+		MIT1002_02448	0.40	+1.9
2,732,839	-		MIT1002_02448	0.52	-0.1
2,732,859	+		MIT1002_02448	0.54	+0.5
2,732,859	+		MIT1002_02448	0.54	+0.3
2,732,859	+		MIT1002_02448	0.54	+0.9
2,732,862	-		MIT1002_02448	0.54	-1.7
2,732,867	-		MIT1002_02448	0.54	+1.2
2,732,867	-		MIT1002_02448	0.54	+0.0
2,732,936	+		MIT1002_02448	0.59	-1.7
2,732,936	-		MIT1002_02448	0.59	-2.0
2,732,944	-		MIT1002_02448	0.60	+0.9
2,732,944	-		MIT1002_02448	0.60	+0.4
2,733,033	-		MIT1002_02448	0.66	-1.6
2,733,034	+		MIT1002_02448	0.66	-1.2
2,733,035	-		MIT1002_02448	0.66	-1.2
2,733,084	-		MIT1002_02448	0.69	-0.9
2,733,086	+		MIT1002_02448	0.69	-1.5
2,733,104	-		MIT1002_02448	0.70	-2.0
2,733,143	+		MIT1002_02448	0.73	-1.4
2,733,151	-		MIT1002_02448	0.74	+0.5
2,733,156	-		MIT1002_02448	0.74	+1.0
2,733,170	+		MIT1002_02448	0.75	+1.5
2,733,170	+		MIT1002_02448	0.75	-1.7
2,733,178	-		MIT1002_02448	0.75	-0.2
2,733,178	-		MIT1002_02448	0.75	+1.8
2,733,178	-		MIT1002_02448	0.75	+0.1
2,733,307	-		MIT1002_02448	0.84	-0.6
2,733,321	-		MIT1002_02448	0.85	+1.9
2,733,357	-		MIT1002_02448	0.88	+0.4
2,733,390	+		MIT1002_02448	0.90	+0.6
2,733,390	+		MIT1002_02448	0.90	+0.1
2,733,398	-				+0.5
2,733,405	-				-0.3
2,733,523	-				+0.9
2,733,539	-				-0.5
2,733,579	-				-0.6
2,733,659	-				-0.3
2,733,659	-				+0.3
2,733,677	-		MIT1002_02449	0.10	-0.7
2,733,775	-		MIT1002_02449	0.19	-0.1
2,733,785	-		MIT1002_02449	0.20	+1.5
2,734,044	-		MIT1002_02449	0.41	+1.6
2,734,126	-		MIT1002_02449	0.48	-2.2
2,734,138	-		MIT1002_02449	0.49	+0.5
2,734,140	-		MIT1002_02449	0.49	+1.9
2,734,264	-		MIT1002_02449	0.60	-0.1
2,734,290	+		MIT1002_02449	0.62	+0.2
2,734,298	-		MIT1002_02449	0.63	+0.3
2,734,322	-		MIT1002_02449	0.65	-0.5
2,734,322	-		MIT1002_02449	0.65	+0.0
2,734,349	+		MIT1002_02449	0.67	-0.1
2,734,357	-		MIT1002_02449	0.68	-1.9
2,734,387	+		MIT1002_02449	0.70	-0.3
2,734,397	+		MIT1002_02449	0.71	+0.5
2,734,448	+		MIT1002_02449	0.75	-0.1
2,734,448	+		MIT1002_02449	0.75	-1.2
2,734,448	+		MIT1002_02449	0.75	+0.5
2,734,448	+		MIT1002_02449	0.75	+0.5
2,734,448	+		MIT1002_02449	0.75	-0.5
2,734,448	+		MIT1002_02449	0.75	+0.4
2,734,448	+		MIT1002_02449	0.75	-0.5
2,734,456	-		MIT1002_02449	0.76	-0.0
2,734,456	-		MIT1002_02449	0.76	+0.9
2,734,456	-		MIT1002_02449	0.76	-1.2
2,734,456	-		MIT1002_02449	0.76	+0.8
2,734,456	-		MIT1002_02449	0.76	+0.1
2,734,456	-		MIT1002_02449	0.76	-0.9
2,734,456	-		MIT1002_02449	0.76	+1.1
2,734,456	-		MIT1002_02449	0.76	+1.1
2,734,456	-		MIT1002_02449	0.76	-1.1
2,734,481	+		MIT1002_02449	0.78	+1.8
2,734,502	-		MIT1002_02449	0.80	+0.8
2,734,511	+		MIT1002_02449	0.81	+2.3
2,734,526	+		MIT1002_02449	0.82	+0.3
2,734,534	-		MIT1002_02449	0.82	-1.7
2,734,534	-		MIT1002_02449	0.82	-0.3
2,734,534	-		MIT1002_02449	0.82	-1.4