Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02404

Experiment: monoculture; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 6
2,683,978	+		MIT1002_02402	0.79	+0.3
2,684,120	-				-0.1
2,684,128	-				-1.1
2,684,128	-				+0.1
2,684,208	+				-1.6
2,684,968	-				-2.4
2,685,003	+				+0.6
2,685,290	-		MIT1002_02404	0.38	-0.6
2,685,290	-		MIT1002_02404	0.38	-2.3
2,685,345	+		MIT1002_02404	0.43	-0.9
2,685,345	+		MIT1002_02404	0.43	+0.6
2,685,345	+		MIT1002_02404	0.43	-1.8
2,685,353	-		MIT1002_02404	0.44	-1.2
2,685,353	-		MIT1002_02404	0.44	-1.5
2,685,353	-		MIT1002_02404	0.44	-4.3
2,685,429	-		MIT1002_02404	0.52	+0.1
2,685,445	+		MIT1002_02404	0.54	-1.4
2,685,453	-		MIT1002_02404	0.55	-0.8
2,685,464	+		MIT1002_02404	0.56	-1.3
2,685,525	+		MIT1002_02404	0.62	-1.9
2,685,533	-		MIT1002_02404	0.63	-3.1
2,685,624	-		MIT1002_02404	0.73	-3.3
2,685,697	-		MIT1002_02404	0.80	-4.6
2,685,717	-		MIT1002_02404	0.82	-3.8
2,685,767	+		MIT1002_02404	0.88	-1.0
2,685,855	+				-2.0
2,685,863	-				-3.4
2,685,890	-				-1.0
2,685,896	-				+0.9
2,685,908	-				+1.6
2,685,908	-				-0.4
2,685,933	-				-1.0
2,685,933	-				-0.3
2,685,933	-				+0.3
2,685,935	+				+0.3
2,685,943	-				-1.2
2,685,943	-				+0.6
2,686,048	+				+0.6
2,686,054	+				+0.3
2,686,209	-		MIT1002_02405	0.18	-0.8
2,686,403	-		MIT1002_02405	0.28	-1.2
2,686,410	-		MIT1002_02405	0.29	+1.9
2,686,610	+		MIT1002_02405	0.40	-0.8
2,686,733	-		MIT1002_02405	0.46	-0.1
2,686,733	-		MIT1002_02405	0.46	-1.6
2,686,733	-		MIT1002_02405	0.46	-2.2
2,686,733	-		MIT1002_02405	0.46	+0.1
2,686,771	-		MIT1002_02405	0.49	-0.6
2,686,834	+		MIT1002_02405	0.52	+0.1
2,686,842	-		MIT1002_02405	0.52	+0.1