Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02309

Experiment: monoculture; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 6
2,575,632	-		MIT1002_02308	0.44	+0.6
2,575,711	+		MIT1002_02308	0.49	-1.2
2,575,755	-		MIT1002_02308	0.53	+0.3
2,575,819	+		MIT1002_02308	0.57	+0.1
2,575,827	-		MIT1002_02308	0.58	-2.1
2,575,872	+		MIT1002_02308	0.61	-0.5
2,575,921	+		MIT1002_02308	0.65	-0.9
2,575,921	+		MIT1002_02308	0.65	+1.3
2,575,929	-		MIT1002_02308	0.66	+0.5
2,575,929	-		MIT1002_02308	0.66	+0.3
2,575,946	+		MIT1002_02308	0.67	+0.5
2,575,954	-		MIT1002_02308	0.67	-0.4
2,576,035	-		MIT1002_02308	0.74	+1.2
2,576,091	+		MIT1002_02308	0.78	+1.2
2,576,092	+		MIT1002_02308	0.78	-0.7
2,576,092	+		MIT1002_02308	0.78	+0.0
2,576,100	-		MIT1002_02308	0.78	+1.3
2,576,100	-		MIT1002_02308	0.78	+1.7
2,576,127	+		MIT1002_02308	0.80	-0.3
2,576,137	+		MIT1002_02308	0.81	+0.7
2,576,216	-		MIT1002_02308	0.87	+0.3
2,576,293	+				+1.3
2,576,336	-				+0.1
2,576,338	+				+0.3
2,576,367	+				-0.7
2,576,367	+				+1.9
2,576,375	-				-1.4
2,576,375	-				-2.0
2,576,634	-				+0.9
2,576,639	-				+0.9
2,576,641	+				+0.3
2,576,660	-		MIT1002_02309	0.12	-0.7
2,576,660	-		MIT1002_02309	0.12	+0.1
2,576,660	-		MIT1002_02309	0.12	+1.6
2,576,718	-		MIT1002_02309	0.17	-1.5
2,576,730	-		MIT1002_02309	0.19	-0.9
2,576,813	-		MIT1002_02309	0.27	-1.0
2,576,813	-		MIT1002_02309	0.27	+0.6
2,576,832	+		MIT1002_02309	0.29	+1.1
2,576,886	+		MIT1002_02309	0.34	+0.3
2,576,894	-		MIT1002_02309	0.35	+0.9
2,576,993	-		MIT1002_02309	0.45	-0.7
2,577,090	+		MIT1002_02309	0.54	-0.8
2,577,094	+		MIT1002_02309	0.55	-1.5
2,577,097	-		MIT1002_02309	0.55	-1.7
2,577,098	-		MIT1002_02309	0.55	+0.7
2,577,185	+		MIT1002_02309	0.64	+0.8
2,577,195	+		MIT1002_02309	0.65	+0.4
2,577,205	+		MIT1002_02309	0.66	-2.2
2,577,247	-		MIT1002_02309	0.70	-0.8
2,577,269	-		MIT1002_02309	0.72	-0.5
2,577,303	-		MIT1002_02309	0.75	-0.9
2,577,376	-		MIT1002_02309	0.83	+0.9
2,577,415	-		MIT1002_02309	0.87	-1.1
2,577,444	-		MIT1002_02309	0.89	-0.1
2,577,455	-				+1.1
2,577,524	+				-0.9
2,577,524	+				+0.1
2,577,524	+				+0.1
2,577,530	+				-0.4
2,577,538	-				-0.6
2,577,705	-				+0.7
2,577,774	+		MIT1002_02310	0.19	-3.1
2,577,774	+		MIT1002_02310	0.19	-0.1
2,577,774	+		MIT1002_02310	0.19	-0.2
2,577,775	+		MIT1002_02310	0.19	+0.6
2,577,775	+		MIT1002_02310	0.19	-0.8
2,577,782	-		MIT1002_02310	0.20	-1.3
2,577,783	-		MIT1002_02310	0.20	-1.7
2,577,783	-		MIT1002_02310	0.20	+1.4
2,577,806	+		MIT1002_02310	0.24	-0.7
2,577,806	+		MIT1002_02310	0.24	-1.3
2,577,814	-		MIT1002_02310	0.25	+0.8
2,577,849	-		MIT1002_02310	0.30	-0.6
2,577,855	-		MIT1002_02310	0.31	+1.8
2,577,877	+		MIT1002_02310	0.35	+0.9
2,577,877	+		MIT1002_02310	0.35	-2.1
2,577,877	+		MIT1002_02310	0.35	+0.2
2,577,885	-		MIT1002_02310	0.36	+0.5
2,577,885	-		MIT1002_02310	0.36	+1.9
2,577,912	+		MIT1002_02310	0.40	-0.5
2,577,912	+		MIT1002_02310	0.40	-1.4
2,577,931	+		MIT1002_02310	0.43	+0.0
2,577,939	-		MIT1002_02310	0.44	+1.5
2,577,939	-		MIT1002_02310	0.44	+0.4
2,578,009	+		MIT1002_02310	0.55	-0.7
2,578,044	-		MIT1002_02310	0.60	-0.8
2,578,060	+		MIT1002_02310	0.62	+0.3
2,578,060	+		MIT1002_02310	0.62	+0.5
2,578,075	+		MIT1002_02310	0.65	+0.9
2,578,075	+		MIT1002_02310	0.65	+0.1
2,578,075	+		MIT1002_02310	0.65	-0.9
2,578,078	-		MIT1002_02310	0.65	+0.9
2,578,078	-		MIT1002_02310	0.65	+0.1
2,578,083	-		MIT1002_02310	0.66	-1.5
2,578,083	-		MIT1002_02310	0.66	+2.1
2,578,134	+		MIT1002_02310	0.74	+0.6
2,578,142	+		MIT1002_02310	0.75	+0.6
2,578,142	-		MIT1002_02310	0.75	+0.1
2,578,377	+		MIT1002_02311	0.11	-0.7
2,578,385	-		MIT1002_02311	0.13	-0.7
2,578,470	-		MIT1002_02311	0.32	+0.1
2,578,513	+		MIT1002_02311	0.42	+1.3
2,578,513	+		MIT1002_02311	0.42	-1.6
2,578,521	-		MIT1002_02311	0.44	+0.8
2,578,521	-		MIT1002_02311	0.44	+0.1
2,578,521	-		MIT1002_02311	0.44	-0.1
2,578,533	+		MIT1002_02311	0.47	-0.8