Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02260

Experiment: monoculture; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 6
2,513,642	+		MIT1002_02259	0.44	-0.9
2,513,664	-		MIT1002_02259	0.46	+1.9
2,513,667	+		MIT1002_02259	0.46	-0.5
2,513,667	+		MIT1002_02259	0.46	-0.2
2,513,667	+		MIT1002_02259	0.46	+0.6
2,513,675	-		MIT1002_02259	0.46	-0.6
2,513,675	-		MIT1002_02259	0.46	+1.0
2,513,720	-		MIT1002_02259	0.49	-1.1
2,513,755	+		MIT1002_02259	0.51	+0.9
2,513,755	+		MIT1002_02259	0.51	+0.3
2,513,760	+		MIT1002_02259	0.51	+1.0
2,513,763	-		MIT1002_02259	0.51	+0.1
2,513,825	+		MIT1002_02259	0.55	-0.9
2,513,825	+		MIT1002_02259	0.55	+0.1
2,513,825	+		MIT1002_02259	0.55	-1.7
2,513,825	+		MIT1002_02259	0.55	-1.5
2,513,825	+		MIT1002_02259	0.55	-0.5
2,513,833	-		MIT1002_02259	0.55	-1.6
2,513,833	-		MIT1002_02259	0.55	+0.3
2,513,833	-		MIT1002_02259	0.55	-0.7
2,513,833	-		MIT1002_02259	0.55	+0.1
2,513,833	-		MIT1002_02259	0.55	+0.1
2,513,833	-		MIT1002_02259	0.55	+0.3
2,513,833	-		MIT1002_02259	0.55	+0.3
2,513,965	+		MIT1002_02259	0.63	-1.3
2,514,063	+		MIT1002_02259	0.68	+0.9
2,514,063	+		MIT1002_02259	0.68	-0.5
2,514,071	-		MIT1002_02259	0.69	+0.7
2,514,071	-		MIT1002_02259	0.69	+0.6
2,514,103	-		MIT1002_02259	0.70	-0.2
2,514,118	-		MIT1002_02259	0.71	+0.3
2,514,118	-		MIT1002_02259	0.71	+0.6
2,514,161	+		MIT1002_02259	0.74	+0.3
2,514,263	+		MIT1002_02259	0.80	+0.0
2,514,273	+		MIT1002_02259	0.80	-0.3
2,514,273	+		MIT1002_02259	0.80	+1.7
2,514,273	+		MIT1002_02259	0.80	-0.5
2,514,281	-		MIT1002_02259	0.81	+0.4
2,514,281	-		MIT1002_02259	0.81	+0.2
2,514,392	-		MIT1002_02259	0.87	-0.1
2,514,392	-		MIT1002_02259	0.87	-0.6
2,514,401	+		MIT1002_02259	0.87	+0.4
2,514,566	+				-0.6
2,514,576	+				+0.2
2,514,584	-				-0.3
2,514,772	+		MIT1002_02260	0.18	+1.6
2,514,772	+		MIT1002_02260	0.18	-0.4
2,514,780	-		MIT1002_02260	0.19	-0.0
2,514,805	+		MIT1002_02260	0.22	-0.4
2,514,831	-		MIT1002_02260	0.25	-1.4
2,514,912	+		MIT1002_02260	0.36	-1.8
2,514,912	+		MIT1002_02260	0.36	-0.3
2,514,912	+		MIT1002_02260	0.36	-0.1
2,514,912	+		MIT1002_02260	0.36	-2.3
2,514,918	-		MIT1002_02260	0.37	+0.1
2,514,920	-		MIT1002_02260	0.37	-0.1
2,514,920	-		MIT1002_02260	0.37	+0.3
2,514,920	-		MIT1002_02260	0.37	-0.5
2,514,920	-		MIT1002_02260	0.37	-0.8
2,514,920	-		MIT1002_02260	0.37	-0.1
2,514,920	-		MIT1002_02260	0.37	-0.9
2,514,929	+		MIT1002_02260	0.38	+1.6
2,514,929	+		MIT1002_02260	0.38	-0.5
2,514,929	+		MIT1002_02260	0.38	-0.8
2,514,929	+		MIT1002_02260	0.38	+0.0
2,514,937	-		MIT1002_02260	0.39	+0.3
2,514,937	-		MIT1002_02260	0.39	-0.8
2,514,937	-		MIT1002_02260	0.39	+0.0
2,514,957	+		MIT1002_02260	0.42	-0.6
2,515,094	+		MIT1002_02260	0.60	-1.8
2,515,110	-		MIT1002_02260	0.62	-0.3
2,515,157	-		MIT1002_02260	0.68	-0.8
2,515,347	+				-0.2
2,515,352	+				+1.5
2,515,354	-				-0.4
2,515,359	+				+0.6
2,515,360	-				+1.5
2,515,360	-				+0.2
2,515,373	+				+0.6
2,515,509	+				-0.8
2,515,519	-				-1.8
2,515,524	-				-1.3
2,515,538	+				-1.6
2,515,538	+				-0.9
2,515,538	+				+0.3
2,515,727	+		MIT1002_02261	0.36	-2.4
2,515,727	+		MIT1002_02261	0.36	+0.3
2,515,734	+		MIT1002_02261	0.38	-3.3
2,515,735	-		MIT1002_02261	0.38	+0.3
2,515,735	-		MIT1002_02261	0.38	-1.9
2,515,787	+		MIT1002_02261	0.47	-0.9
2,515,848	+		MIT1002_02261	0.57	-3.0
2,515,856	-		MIT1002_02261	0.59	-2.0
2,515,856	-		MIT1002_02261	0.59	-1.4
2,515,938	+		MIT1002_02261	0.73	+0.1
2,515,946	-		MIT1002_02261	0.74	-2.7
2,515,960	-		MIT1002_02261	0.76	-2.6
2,516,042	+				-0.2
2,516,250	+				+1.7
2,516,253	+				-1.8
2,516,261	-				+0.6
2,516,346	-				+1.5
2,516,354	+				+0.5
2,516,364	+				+0.7
2,516,372	-				-1.5