Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02027

Experiment: monoculture; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 6
2,268,022	+		MIT1002_02026	0.37	-2.5
2,268,027	+		MIT1002_02026	0.37	-0.2
2,268,047	+		MIT1002_02026	0.38	+1.3
2,268,179	+		MIT1002_02026	0.48	+0.3
2,268,206	+		MIT1002_02026	0.50	-0.5
2,268,223	+		MIT1002_02026	0.52	+2.6
2,268,223	+		MIT1002_02026	0.52	+0.1
2,268,231	+		MIT1002_02026	0.52	+1.9
2,268,273	+		MIT1002_02026	0.55	+2.1
2,268,344	+		MIT1002_02026	0.61	+1.1
2,268,396	-		MIT1002_02026	0.65	-0.4
2,268,430	+		MIT1002_02026	0.67	-0.1
2,268,472	-		MIT1002_02026	0.70	+0.5
2,268,605	+		MIT1002_02026	0.80	-0.2
2,268,674	-		MIT1002_02026	0.85	-1.4
2,268,758	-				-1.9
2,268,773	+				+0.5
2,268,804	-				-0.1
2,268,815	-				+0.2
2,268,840	+				-2.3
2,269,056	+				+0.6
2,269,064	-				-0.5
2,269,073	-				-0.6
2,269,168	+		MIT1002_02027	0.15	+0.9
2,269,168	+		MIT1002_02027	0.15	-1.6
2,269,168	+		MIT1002_02027	0.15	+1.2
2,269,170	+		MIT1002_02027	0.16	+2.9
2,269,278	-		MIT1002_02027	0.23	+0.8
2,269,278	-		MIT1002_02027	0.23	-0.1
2,269,353	-		MIT1002_02027	0.28	-0.7
2,269,365	+		MIT1002_02027	0.29	-1.4
2,269,583	+		MIT1002_02027	0.43	-0.1
2,269,583	+		MIT1002_02027	0.43	-0.7
2,269,583	+		MIT1002_02027	0.43	+1.9
2,269,591	-		MIT1002_02027	0.44	-0.5
2,269,609	+		MIT1002_02027	0.45	-1.9
2,269,609	+		MIT1002_02027	0.45	-1.9
2,269,609	+		MIT1002_02027	0.45	-2.5
2,269,609	+		MIT1002_02027	0.45	+0.6
2,269,800	+		MIT1002_02027	0.58	+0.0
2,269,849	+		MIT1002_02027	0.62	+2.2
2,269,898	+		MIT1002_02027	0.65	-2.2
2,269,900	-		MIT1002_02027	0.65	-1.1
2,270,035	-		MIT1002_02027	0.74	-0.2
2,270,111	-		MIT1002_02027	0.79	-1.7
2,270,169	+		MIT1002_02027	0.83	+0.1
2,270,196	+		MIT1002_02027	0.85	-1.1
2,270,196	+		MIT1002_02027	0.85	-2.8
2,270,196	+		MIT1002_02027	0.85	-1.0
2,270,204	-		MIT1002_02027	0.86	-0.5
2,270,204	-		MIT1002_02027	0.86	-0.6
2,270,244	+		MIT1002_02027	0.88	-1.1
2,270,255	+		MIT1002_02027	0.89	-1.4
2,270,411	+				-2.5
2,270,419	-				+1.6
2,270,431	-				-0.6
2,270,484	-				+1.3
2,270,529	+				+0.6
2,270,530	-				+1.2
2,270,532	+				-0.9
2,270,532	+				+1.3
2,270,540	-				-0.1
2,270,687	+				+0.8
2,270,710	-				+0.2
2,270,720	+				-1.6
2,270,774	-		MIT1002_02028	0.12	+0.6
2,270,776	+		MIT1002_02028	0.12	+1.7
2,270,818	-		MIT1002_02028	0.14	+0.1
2,270,834	+		MIT1002_02028	0.14	+0.6
2,270,888	-		MIT1002_02028	0.16	-0.3
2,270,888	-		MIT1002_02028	0.16	-1.5
2,270,888	-		MIT1002_02028	0.16	+0.9
2,270,888	-		MIT1002_02028	0.16	-0.1
2,270,909	+		MIT1002_02028	0.17	+0.6
2,270,959	-		MIT1002_02028	0.19	-0.4
2,271,067	+		MIT1002_02028	0.23	-0.4
2,271,175	+		MIT1002_02028	0.27	+0.8
2,271,185	+		MIT1002_02028	0.28	-0.7
2,271,190	+		MIT1002_02028	0.28	+0.8
2,271,244	-		MIT1002_02028	0.30	+0.3