Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02006

Experiment: monoculture; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 6
2,240,775	+		MIT1002_02005	0.34	+0.3
2,240,828	-		MIT1002_02005	0.40	+0.9
2,241,667	-		MIT1002_02006	0.12	+1.8
2,241,698	+		MIT1002_02006	0.14	-1.6
2,241,766	+		MIT1002_02006	0.19	-1.2
2,241,774	-		MIT1002_02006	0.20	-0.3
2,241,843	-		MIT1002_02006	0.25	-0.6
2,241,973	+		MIT1002_02006	0.34	-3.1
2,241,973	+		MIT1002_02006	0.34	-0.4
2,241,973	+		MIT1002_02006	0.34	+0.1
2,241,981	-		MIT1002_02006	0.35	+0.9
2,242,129	+		MIT1002_02006	0.46	-0.7
2,242,134	+		MIT1002_02006	0.46	+2.5
2,242,142	-		MIT1002_02006	0.47	-0.4
2,242,142	-		MIT1002_02006	0.47	+0.1
2,242,154	+		MIT1002_02006	0.47	-1.0
2,242,163	-		MIT1002_02006	0.48	-0.3
2,242,313	+		MIT1002_02006	0.59	+2.5
2,242,313	+		MIT1002_02006	0.59	+0.1
2,242,313	+		MIT1002_02006	0.59	+1.6
2,242,321	-		MIT1002_02006	0.60	-0.1
2,242,359	+		MIT1002_02006	0.62	-1.7
2,242,536	-		MIT1002_02006	0.75	-0.9
2,242,580	+		MIT1002_02006	0.78	-0.2
2,242,672	+		MIT1002_02006	0.85	+0.1
2,242,733	+		MIT1002_02006	0.90	-1.6
2,242,736	-		MIT1002_02006	0.90	-1.9
2,242,812	+				+2.6
2,242,812	+				+0.4
2,242,812	+				-0.2
2,242,812	+				-0.6
2,242,812	+				+0.3
2,242,812	+				+1.3
2,242,820	-				+0.8
2,242,820	-				-0.3
2,242,820	-				+0.4
2,242,820	-				-0.7
2,242,820	-				+0.6
2,242,820	-				-1.9
2,242,820	-				-0.3
2,242,932	+				+0.6
2,242,945	-				-0.1
2,243,011	-				+1.8
2,243,027	+				-0.2
2,243,167	+		MIT1002_02007	0.24	-0.6
2,243,167	+		MIT1002_02007	0.24	+0.1
2,243,175	-		MIT1002_02007	0.25	-0.4
2,243,259	-		MIT1002_02007	0.40	+0.3
2,243,426	+		MIT1002_02007	0.69	+0.6
2,243,450	+		MIT1002_02007	0.73	+0.1
2,243,505	-		MIT1002_02007	0.83	+0.1
2,243,505	-		MIT1002_02007	0.83	+1.4
2,243,549	+				+1.5
2,243,549	+				-0.5
2,243,549	+				+0.1
2,243,557	-				+0.0
2,243,557	-				-0.3
2,243,557	-				+1.8
2,243,557	-				+2.4
2,243,557	-				-0.7
2,243,559	+				+1.6
2,243,559	+				-0.2
2,243,559	+				-2.0
2,243,567	-				+0.9
2,243,610	+				-0.8
2,243,626	-				-0.8
2,243,651	+				+0.3
2,243,703	+				-2.3
2,243,703	-				-3.3
2,243,865	-		MIT1002_02008	0.14	-5.7