Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01723

Experiment: monoculture; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 6
1,913,148	+		MIT1002_01722	0.52	+0.2
1,913,156	+		MIT1002_01722	0.53	+0.9
1,913,164	-		MIT1002_01722	0.53	-0.8
1,913,164	-		MIT1002_01722	0.53	-1.0
1,913,189	+		MIT1002_01722	0.55	-0.3
1,913,277	+		MIT1002_01722	0.60	+2.2
1,913,326	+		MIT1002_01722	0.63	-0.4
1,913,326	+		MIT1002_01722	0.63	-0.0
1,913,334	-		MIT1002_01722	0.64	+0.6
1,913,334	-		MIT1002_01722	0.64	-1.2
1,913,334	-		MIT1002_01722	0.64	+2.4
1,913,347	+		MIT1002_01722	0.65	-0.8
1,913,390	+		MIT1002_01722	0.67	-1.2
1,913,403	+		MIT1002_01722	0.68	-0.5
1,913,421	+		MIT1002_01722	0.69	+0.2
1,913,442	-		MIT1002_01722	0.71	-1.9
1,913,482	+		MIT1002_01722	0.73	-2.3
1,913,488	-		MIT1002_01722	0.73	-0.1
1,913,507	-		MIT1002_01722	0.75	-2.3
1,913,531	-		MIT1002_01722	0.76	-1.3
1,913,531	-		MIT1002_01722	0.76	-1.3
1,913,531	-		MIT1002_01722	0.76	-0.1
1,913,531	-		MIT1002_01722	0.76	+0.6
1,913,531	-		MIT1002_01722	0.76	-1.0
1,913,531	-		MIT1002_01722	0.76	-1.2
1,913,575	+		MIT1002_01722	0.79	-0.7
1,913,583	+		MIT1002_01722	0.79	+0.6
1,913,583	-		MIT1002_01722	0.79	+2.4
1,913,596	+		MIT1002_01722	0.80	-0.1
1,913,603	+		MIT1002_01722	0.81	+3.2
1,913,634	-		MIT1002_01722	0.83	+0.1
1,913,693	+		MIT1002_01722	0.86	-0.3
1,913,724	-		MIT1002_01722	0.88	-0.8
1,913,846	+				+0.5
1,913,846	+				+1.7
1,913,846	+				+0.0
1,913,854	-				+0.0
1,913,854	-				+0.0
1,913,854	-				+0.8
1,913,902	-				+1.1
1,913,904	-				+0.6
1,913,957	+				-1.4
1,914,049	+				+0.5
1,914,116	+				-0.3
1,914,124	-				-1.6
1,914,154	-				-2.9
1,914,205	-				-0.9
1,914,241	-		MIT1002_01723	0.11	-1.3
1,914,247	-		MIT1002_01723	0.11	-0.9
1,914,334	-		MIT1002_01723	0.19	+0.6
1,914,354	-		MIT1002_01723	0.21	+0.7
1,914,354	-		MIT1002_01723	0.21	+1.0
1,914,389	+		MIT1002_01723	0.24	-0.9
1,914,431	+		MIT1002_01723	0.27	-0.8
1,914,439	-		MIT1002_01723	0.28	-0.3
1,914,472	-		MIT1002_01723	0.31	+0.1
1,914,537	+		MIT1002_01723	0.37	-0.5
1,914,537	+		MIT1002_01723	0.37	-1.4
1,914,537	+		MIT1002_01723	0.37	-0.4
1,914,539	+		MIT1002_01723	0.37	+0.5
1,914,545	-		MIT1002_01723	0.37	+2.0
1,914,609	+		MIT1002_01723	0.43	+0.9
1,914,609	+		MIT1002_01723	0.43	-0.2
1,914,617	-		MIT1002_01723	0.44	-0.4
1,914,731	+		MIT1002_01723	0.54	-0.1
1,914,741	+		MIT1002_01723	0.54	-0.6
1,914,749	-		MIT1002_01723	0.55	-0.4
1,914,754	-		MIT1002_01723	0.56	+1.9
1,914,754	-		MIT1002_01723	0.56	-1.9
1,914,756	+		MIT1002_01723	0.56	+11.5
1,914,814	+		MIT1002_01723	0.61	-0.7
1,914,848	+		MIT1002_01723	0.64	-0.3
1,914,848	+		MIT1002_01723	0.64	-1.2
1,914,849	-		MIT1002_01723	0.64	-0.0
1,914,856	-		MIT1002_01723	0.64	-0.4
1,914,875	+		MIT1002_01723	0.66	-3.0
1,914,876	-		MIT1002_01723	0.66	-1.3
1,914,944	+		MIT1002_01723	0.72	+0.7
1,914,960	+		MIT1002_01723	0.74	-1.2
1,914,974	-		MIT1002_01723	0.75	-0.5
1,914,974	-		MIT1002_01723	0.75	+0.4
1,915,020	+		MIT1002_01723	0.79	-2.0
1,915,020	+		MIT1002_01723	0.79	-1.0
1,915,089	+		MIT1002_01723	0.85	+0.9
1,915,089	+		MIT1002_01723	0.85	-2.2
1,915,133	+		MIT1002_01723	0.89	-0.1
1,915,141	-		MIT1002_01723	0.89	-0.2
1,915,141	-		MIT1002_01723	0.89	-0.7
1,915,174	-				+1.5
1,915,201	-				-0.6
1,915,201	-				+0.6
1,915,201	-				+0.5
1,915,201	-				-1.1
1,915,289	+				+0.5
1,915,490	+				-2.2
1,915,517	+				-1.9
1,915,558	+				-0.6
1,915,576	-				-0.5
1,915,677	-				-1.3
1,915,707	-		MIT1002_01724	0.10	-1.5
1,915,875	-		MIT1002_01724	0.15	-2.9
1,915,924	+		MIT1002_01724	0.16	-0.8
1,915,937	-		MIT1002_01724	0.17	-1.9
1,915,975	+		MIT1002_01724	0.18	-3.3
1,916,076	+		MIT1002_01724	0.21	-2.3
1,916,140	+		MIT1002_01724	0.23	-2.3
1,916,187	-		MIT1002_01724	0.24	-1.8
1,916,206	-		MIT1002_01724	0.25	-0.4
1,916,255	-		MIT1002_01724	0.26	-1.6