Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01701

Experiment: monoculture; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 6
1,886,608	+				+0.3
1,886,616	-				+0.6
1,886,642	-				+1.0
1,886,653	-				+2.2
1,886,655	+				+0.7
1,886,672	+				+0.9
1,886,718	+				-0.3
1,888,062	-				-2.0
1,888,062	-				-2.0
1,888,062	-				-0.8
1,888,076	-				+0.2
1,888,162	-		MIT1002_01702	0.10	-0.7
1,888,178	+		MIT1002_01702	0.11	-0.9
1,888,195	+		MIT1002_01702	0.12	-1.3
1,888,270	+		MIT1002_01702	0.18	-0.6
1,888,292	+		MIT1002_01702	0.20	+0.2
1,888,310	-		MIT1002_01702	0.21	-0.3
1,888,352	-		MIT1002_01702	0.24	-0.3
1,888,358	+		MIT1002_01702	0.25	-0.1
1,888,358	+		MIT1002_01702	0.25	-0.1
1,888,358	+		MIT1002_01702	0.25	-2.4
1,888,366	-		MIT1002_01702	0.25	-0.1
1,888,366	-		MIT1002_01702	0.25	+3.5
1,888,527	-		MIT1002_01702	0.37	-1.1
1,888,577	-		MIT1002_01702	0.41	-2.6
1,888,587	-		MIT1002_01702	0.42	+0.2
1,888,605	+		MIT1002_01702	0.43	-0.1
1,888,605	+		MIT1002_01702	0.43	-0.3
1,888,640	-		MIT1002_01702	0.46	-1.3
1,888,722	+		MIT1002_01702	0.52	+0.4
1,888,877	+		MIT1002_01702	0.63	-0.3
1,888,882	+		MIT1002_01702	0.63	-0.8
1,888,885	-		MIT1002_01702	0.64	-0.7