Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01631

Experiment: monoculture; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 6
1,798,498	+		MIT1002_01630	0.77	+0.1
1,798,506	-		MIT1002_01630	0.78	+0.6
1,798,506	-		MIT1002_01630	0.78	-0.0
1,798,506	-		MIT1002_01630	0.78	-0.2
1,798,540	-		MIT1002_01630	0.79	+0.0
1,798,545	+		MIT1002_01630	0.79	-1.3
1,798,545	+		MIT1002_01630	0.79	-2.2
1,798,547	+		MIT1002_01630	0.79	+0.8
1,798,547	+		MIT1002_01630	0.79	+0.8
1,798,553	-		MIT1002_01630	0.79	-1.0
1,798,553	-		MIT1002_01630	0.79	-0.4
1,798,553	-		MIT1002_01630	0.79	-1.6
1,798,555	-		MIT1002_01630	0.80	-0.9
1,798,570	+		MIT1002_01630	0.80	-1.3
1,798,578	-		MIT1002_01630	0.80	+0.1
1,798,595	+		MIT1002_01630	0.81	+0.8
1,798,596	+		MIT1002_01630	0.81	-0.4
1,798,605	-		MIT1002_01630	0.82	-0.3
1,798,684	+		MIT1002_01630	0.85	-1.2
1,798,700	-		MIT1002_01630	0.85	+1.4
1,798,710	-		MIT1002_01630	0.86	-0.6
1,798,727	-		MIT1002_01630	0.86	-0.4
1,798,778	+		MIT1002_01630	0.89	-0.0
1,798,786	-		MIT1002_01630	0.89	-1.1
1,798,788	-		MIT1002_01630	0.89	-0.2
1,798,801	+		MIT1002_01630	0.89	-1.6
1,798,801	+		MIT1002_01630	0.89	-0.5
1,798,806	+		MIT1002_01630	0.90	+1.6
1,798,806	+		MIT1002_01630	0.90	+0.4
1,798,806	+		MIT1002_01630	0.90	+0.2
1,798,809	-		MIT1002_01630	0.90	+0.7
1,798,809	-		MIT1002_01630	0.90	-1.0
1,798,809	-		MIT1002_01630	0.90	+1.1
1,798,814	-				-0.7
1,798,814	-				-0.6
1,798,818	-				+0.9
1,798,878	+				+1.5
1,798,894	-				+0.7
1,798,937	+				-0.3
1,798,937	+				+2.8
1,798,993	+				+0.9
1,798,993	-				-0.1
1,799,040	+				+0.1
1,799,046	+				-0.9
1,799,047	-				+0.9
1,799,048	-				+0.6
1,799,051	+				-0.7
1,799,054	+				+0.5
1,799,054	-				-1.6
1,799,054	-				-0.7
1,799,056	+				+0.7
1,799,056	+				+0.2
1,799,056	+				-2.4
1,799,056	+				-0.6
1,799,056	+				+0.7
1,799,056	+				-1.0
1,799,056	+				-0.1
1,799,056	+				-0.3
1,799,058	+				-0.9
1,799,059	-				-0.2
1,799,062	+				-0.1
1,799,063	+				+1.3
1,799,063	+				+0.2
1,799,063	+				-1.0
1,799,063	+				+0.7
1,799,063	+				-1.7
1,799,063	+				-0.7
1,799,063	+				-0.5
1,799,063	+				-0.8
1,799,063	+				+1.4
1,799,063	+				-0.2
1,799,063	+				+1.5
1,799,064	-				+1.4
1,799,064	-				+0.5
1,799,064	-				+0.9
1,799,064	-				+0.3
1,799,064	-				+0.1
1,799,071	-				+1.5
1,799,071	-				+1.4
1,799,071	-				-0.7
1,799,071	-				-1.3
1,799,071	-				-0.6
1,799,071	-				+3.6
1,799,071	-				-0.6
1,799,071	-				-0.3
1,799,071	-				-0.3
1,799,071	-				+2.8
1,799,071	-				-1.6
1,799,071	-				-1.2
1,799,071	-				-1.7
1,799,071	-				+1.7
1,799,071	-				-1.0
1,799,071	-				+1.0
1,799,071	-				-1.2
1,799,071	-				-0.9
1,799,085	-				+0.8
1,799,097	+				+0.3
1,799,116	+				+0.9
1,799,116	+				+0.3
1,799,116	+				-1.0
1,799,116	+				-1.8
1,799,116	+				-0.7
1,799,121	+				-0.4
1,799,121	+				-2.0
1,799,121	+				-0.3
1,799,124	-				+0.0
1,799,124	-				+0.8
1,799,124	-				-0.3
1,799,128	+				-0.6
1,799,129	-				-0.2
1,799,129	-				+0.9
1,799,136	-				-1.7
1,799,137	+				-0.1
1,799,137	+				-0.3
1,799,137	+				+1.2
1,799,137	+				+0.7
1,799,150	+				+1.2
1,799,151	+				+1.8
1,799,228	+				-1.5
1,799,234	+				-0.2
1,799,236	-				-1.3
1,799,237	-				+1.0
1,799,238	-				-2.6
1,799,242	+				+0.5
1,799,242	+				+2.4
1,799,331	+				-1.2
1,799,331	+				-0.4
1,799,331	+				+0.6
1,799,346	+				-0.2
1,799,346	+				-0.3
1,799,389	+				-1.8
1,799,429	-				+2.1
1,799,434	-				+0.2
1,799,482	+				-1.0
1,799,494	+				+0.0
1,799,494	+				-0.3
1,799,501	+				+0.3
1,799,501	+				-1.6
1,799,501	+				-0.1
1,799,502	-				-0.6
1,799,509	-				+1.1
1,799,509	-				+1.4
1,799,509	-				+2.1
1,799,509	-				-1.5
1,799,509	-				-1.0
1,799,509	-				-0.1
1,799,521	-				-1.9
1,799,561	+		MIT1002_01631	0.16	-0.6
1,799,564	+		MIT1002_01631	0.17	-0.7
1,799,564	+		MIT1002_01631	0.17	+0.6
1,799,564	+		MIT1002_01631	0.17	+1.2
1,799,566	+		MIT1002_01631	0.18	+1.9
1,799,569	+		MIT1002_01631	0.18	+1.1
1,799,569	+		MIT1002_01631	0.18	+0.4
1,799,572	-		MIT1002_01631	0.19	-0.5
1,799,572	-		MIT1002_01631	0.19	+0.6
1,799,572	-		MIT1002_01631	0.19	+1.1
1,799,574	-		MIT1002_01631	0.20	-0.5
1,799,574	-		MIT1002_01631	0.20	-1.4
1,799,574	-		MIT1002_01631	0.20	-1.0
1,799,574	-		MIT1002_01631	0.20	-0.0
1,799,574	-		MIT1002_01631	0.20	-2.0
1,799,576	+		MIT1002_01631	0.20	+0.1
1,799,576	+		MIT1002_01631	0.20	-1.5
1,799,576	+		MIT1002_01631	0.20	+2.7
1,799,576	+		MIT1002_01631	0.20	+0.1
1,799,577	-		MIT1002_01631	0.20	+0.0
1,799,577	-		MIT1002_01631	0.20	-0.5
1,799,584	-		MIT1002_01631	0.22	-0.5
1,799,584	-		MIT1002_01631	0.22	+0.5
1,799,584	-		MIT1002_01631	0.22	+0.4
1,799,584	-		MIT1002_01631	0.22	+2.0
1,799,605	+		MIT1002_01631	0.28	+0.8
1,799,610	+		MIT1002_01631	0.29	-0.1
1,799,613	-		MIT1002_01631	0.30	+0.7
1,799,621	+		MIT1002_01631	0.32	+0.4
1,799,621	+		MIT1002_01631	0.32	+1.4
1,799,621	+		MIT1002_01631	0.32	+0.3
1,799,628	-		MIT1002_01631	0.34	-0.5
1,799,629	-		MIT1002_01631	0.34	+0.3
1,799,683	+		MIT1002_01631	0.48	+0.2
1,799,691	-		MIT1002_01631	0.50	+1.6
1,799,724	+		MIT1002_01631	0.58	-1.2
1,799,724	+		MIT1002_01631	0.58	+0.4
1,799,732	-		MIT1002_01631	0.60	+0.0
1,799,732	-		MIT1002_01631	0.60	-1.6
1,799,792	-		MIT1002_01631	0.76	-1.0
1,799,792	-		MIT1002_01631	0.76	-1.7
1,799,801	-		MIT1002_01631	0.78	+0.1
1,799,808	+		MIT1002_01631	0.80	-0.1
1,799,808	+		MIT1002_01631	0.80	+1.0
1,799,808	+		MIT1002_01631	0.80	-0.7
1,799,808	+		MIT1002_01631	0.80	+0.5
1,799,808	+		MIT1002_01631	0.80	-2.5
1,799,808	+		MIT1002_01631	0.80	+0.8
1,799,808	+		MIT1002_01631	0.80	+0.5
1,799,808	+		MIT1002_01631	0.80	+1.4
1,799,808	+		MIT1002_01631	0.80	-0.9
1,799,808	+		MIT1002_01631	0.80	+0.6
1,799,808	+		MIT1002_01631	0.80	-1.2
1,799,808	+		MIT1002_01631	0.80	+0.2
1,799,808	+		MIT1002_01631	0.80	+0.7
1,799,808	+		MIT1002_01631	0.80	-0.3
1,799,808	+		MIT1002_01631	0.80	-0.8
1,799,808	+		MIT1002_01631	0.80	-0.4
1,799,808	+		MIT1002_01631	0.80	+0.7
1,799,808	+		MIT1002_01631	0.80	+0.1
1,799,808	+		MIT1002_01631	0.80	-0.4
1,799,812	+		MIT1002_01631	0.81	+1.6
1,799,813	+		MIT1002_01631	0.81	-0.6
1,799,816	-		MIT1002_01631	0.82	+0.3
1,799,816	-		MIT1002_01631	0.82	+0.2
1,799,816	-		MIT1002_01631	0.82	+0.5
1,799,816	-		MIT1002_01631	0.82	-1.4
1,799,816	-		MIT1002_01631	0.82	+0.9
1,799,816	-		MIT1002_01631	0.82	-1.4
1,799,816	-		MIT1002_01631	0.82	+0.2
1,799,816	-		MIT1002_01631	0.82	-0.7
1,799,816	-		MIT1002_01631	0.82	+1.2
1,799,816	-		MIT1002_01631	0.82	+1.3
1,799,816	-		MIT1002_01631	0.82	+0.4
1,799,816	-		MIT1002_01631	0.82	-1.0
1,799,816	-		MIT1002_01631	0.82	-0.4
1,799,816	-		MIT1002_01631	0.82	+2.2
1,799,816	-		MIT1002_01631	0.82	+1.6
1,799,816	-		MIT1002_01631	0.82	-0.1
1,799,816	-		MIT1002_01631	0.82	+3.4
1,799,816	-		MIT1002_01631	0.82	+0.7
1,799,816	-		MIT1002_01631	0.82	+1.1
1,799,816	-		MIT1002_01631	0.82	-0.1
1,799,816	-		MIT1002_01631	0.82	-1.8
1,799,816	-		MIT1002_01631	0.82	-1.2
1,799,816	-		MIT1002_01631	0.82	-1.2
1,799,816	-		MIT1002_01631	0.82	+0.2
1,799,816	-		MIT1002_01631	0.82	-1.7
1,799,816	-		MIT1002_01631	0.82	-1.0
1,799,821	-		MIT1002_01631	0.83	-0.6
1,799,821	-		MIT1002_01631	0.83	-1.5
1,799,826	-		MIT1002_01631	0.85	+0.2
1,799,838	-		MIT1002_01631	0.88	-0.6
1,799,878	+				+1.0
1,799,878	+				+1.6
1,799,883	+				-0.2
1,799,886	-				+0.6
1,799,911	+				+0.8
1,799,971	+				-4.2
1,799,979	-				+1.5
1,799,979	-				-0.4
1,799,979	-				+0.9
1,799,980	-				+2.1
1,799,982	+				-0.5
1,799,990	-		MIT1002_01632	0.10	-2.0
1,800,007	+		MIT1002_01632	0.12	+0.7
1,800,017	+		MIT1002_01632	0.13	-0.4
1,800,017	+		MIT1002_01632	0.13	+1.6
1,800,020	-		MIT1002_01632	0.14	-0.5
1,800,041	+		MIT1002_01632	0.16	-0.5
1,800,124	+		MIT1002_01632	0.25	+0.6
1,800,125	+		MIT1002_01632	0.25	-0.3
1,800,125	+		MIT1002_01632	0.25	-1.4
1,800,135	+		MIT1002_01632	0.26	-1.3
1,800,145	-		MIT1002_01632	0.27	+0.9
1,800,149	+		MIT1002_01632	0.27	+1.1
1,800,227	+		MIT1002_01632	0.36	+0.1
1,800,287	-		MIT1002_01632	0.42	-1.9
1,800,361	-		MIT1002_01632	0.50	+0.1
1,800,362	-		MIT1002_01632	0.50	+0.4
1,800,394	-		MIT1002_01632	0.54	-0.3
1,800,394	-		MIT1002_01632	0.54	+0.5
1,800,395	+		MIT1002_01632	0.54	+1.3
1,800,403	-		MIT1002_01632	0.55	-0.3
1,800,405	+		MIT1002_01632	0.55	-1.0
1,800,442	+		MIT1002_01632	0.59	+0.4
1,800,450	+		MIT1002_01632	0.60	-0.6
1,800,501	+		MIT1002_01632	0.65	-0.7
1,800,572	-		MIT1002_01632	0.73	+1.0
1,800,578	+		MIT1002_01632	0.73	+0.2
1,800,580	+		MIT1002_01632	0.74	+0.3
1,800,588	-		MIT1002_01632	0.74	+0.1
1,800,588	-		MIT1002_01632	0.74	+0.7
1,800,588	-		MIT1002_01632	0.74	+0.6
1,800,588	-		MIT1002_01632	0.74	-1.1
1,800,659	-		MIT1002_01632	0.82	+1.7
1,800,661	+		MIT1002_01632	0.82	+1.0
1,800,666	+		MIT1002_01632	0.83	-0.0
1,800,685	-		MIT1002_01632	0.85	-1.7
1,800,691	+		MIT1002_01632	0.86	+0.8
1,800,691	+		MIT1002_01632	0.86	-0.6
1,800,699	-		MIT1002_01632	0.86	-0.2
1,800,707	+		MIT1002_01632	0.87	+0.3
1,800,708	+		MIT1002_01632	0.87	-0.2
1,800,714	+		MIT1002_01632	0.88	-2.3
1,800,714	+		MIT1002_01632	0.88	+1.5
1,800,714	+		MIT1002_01632	0.88	+1.3
1,800,714	+		MIT1002_01632	0.88	-1.6
1,800,714	+		MIT1002_01632	0.88	-0.7
1,800,714	+		MIT1002_01632	0.88	-2.3
1,800,714	+		MIT1002_01632	0.88	-0.3
1,800,714	+		MIT1002_01632	0.88	-1.0
1,800,714	+		MIT1002_01632	0.88	+0.1
1,800,714	+		MIT1002_01632	0.88	+0.4
1,800,715	-		MIT1002_01632	0.88	+0.8
1,800,715	-		MIT1002_01632	0.88	-1.1
1,800,721	+		MIT1002_01632	0.89	+0.5
1,800,721	+		MIT1002_01632	0.89	+0.8
1,800,721	+		MIT1002_01632	0.89	+2.0
1,800,721	+		MIT1002_01632	0.89	+0.4
1,800,722	+		MIT1002_01632	0.89	-0.9
1,800,722	-		MIT1002_01632	0.89	-0.7
1,800,722	-		MIT1002_01632	0.89	-0.2
1,800,722	-		MIT1002_01632	0.89	-0.2
1,800,722	-		MIT1002_01632	0.89	-0.0
1,800,722	-		MIT1002_01632	0.89	+2.0
1,800,722	-		MIT1002_01632	0.89	-2.0
1,800,722	-		MIT1002_01632	0.89	+0.3
1,800,722	-		MIT1002_01632	0.89	+0.2
1,800,722	-		MIT1002_01632	0.89	+0.5
1,800,730	-		MIT1002_01632	0.90	+1.0
1,800,736	+				-0.2
1,800,744	-				+1.6
1,800,744	-				-1.4
1,800,744	-				-0.8
1,800,744	-				-0.4
1,800,744	-				+0.3
1,800,746	-				+1.1
1,800,750	-				+0.9
1,800,760	-				-3.4
1,800,781	+				+0.2
1,800,782	+				-0.5
1,800,782	+				+0.6
1,800,785	-				+1.2
1,800,785	-				+2.6
1,800,790	-				-2.2
1,800,790	-				+0.7
1,800,790	-				-3.8