Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01546

Experiment: monoculture; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 6
1,699,985	-		MIT1002_01546	0.18	-0.9
1,699,995	-		MIT1002_01546	0.21	-2.0
1,700,023	+		MIT1002_01546	0.29	-3.5
1,700,033	+		MIT1002_01546	0.32	-1.3
1,700,036	-		MIT1002_01546	0.32	-1.0
1,700,086	+		MIT1002_01546	0.47	-1.8
1,700,131	-		MIT1002_01546	0.60	+0.8
1,700,258	+				+0.2
1,700,274	+				-2.0
1,700,297	-				+0.8
1,700,317	+				-1.5
1,700,317	+				-3.3
1,700,317	+				-2.5
1,700,317	+				-2.2
1,700,317	+				-2.0
1,700,317	+				-1.7
1,700,317	+				-1.5
1,700,317	+				-2.0
1,700,317	+				-1.7
1,700,317	+				-0.0
1,700,317	+				-2.2
1,700,317	+				-1.8
1,700,317	+				-2.3
1,700,317	+				-0.5
1,700,317	+				-1.3
1,700,317	+				-2.5
1,700,317	+				-2.9
1,700,317	+				-0.2
1,700,317	+				-2.0
1,700,325	-				-0.3
1,700,325	-				-0.9
1,700,325	-				+1.2
1,700,325	-				+1.5
1,700,325	-				-0.0
1,700,325	-				+0.2
1,700,325	-				+1.8
1,700,325	-				-1.0
1,700,325	-				-1.3
1,700,325	-				-1.0
1,700,325	-				-0.9
1,700,325	-				+1.2
1,700,325	-				-2.4
1,700,325	-				-0.4
1,700,526	+				-0.4
1,700,533	+				-0.4
1,700,548	+				+2.0
1,700,653	+		MIT1002_01547	0.25	-1.7
1,700,653	+		MIT1002_01547	0.25	+0.9
1,700,653	+		MIT1002_01547	0.25	-1.2
1,700,661	-		MIT1002_01547	0.27	+0.3
1,700,661	-		MIT1002_01547	0.27	+0.5
1,700,661	-		MIT1002_01547	0.27	-0.5
1,700,661	-		MIT1002_01547	0.27	-1.2
1,700,661	-		MIT1002_01547	0.27	-2.7
1,700,790	+		MIT1002_01547	0.52	+0.9
1,700,811	+		MIT1002_01547	0.56	-0.3
1,700,819	-		MIT1002_01547	0.58	+0.4
1,700,865	+		MIT1002_01547	0.67	+1.3
1,700,947	-		MIT1002_01547	0.84	-1.2
1,701,050	+				-0.8
1,701,082	-		MIT1002_01548	0.13	+1.4
1,701,121	+		MIT1002_01548	0.23	-0.2
1,701,129	+		MIT1002_01548	0.25	+0.0
1,701,162	+		MIT1002_01548	0.33	-0.5
1,701,204	-		MIT1002_01548	0.44	+1.6
1,701,214	+		MIT1002_01548	0.46	+1.8
1,701,214	+		MIT1002_01548	0.46	-0.2
1,701,214	+		MIT1002_01548	0.46	-0.2
1,701,214	+		MIT1002_01548	0.46	-2.6
1,701,214	+		MIT1002_01548	0.46	-0.2
1,701,222	-		MIT1002_01548	0.48	+2.0
1,701,222	-		MIT1002_01548	0.48	+0.0
1,701,222	-		MIT1002_01548	0.48	+2.0
1,701,232	-		MIT1002_01548	0.51	+1.6
1,701,232	-		MIT1002_01548	0.51	+1.4