Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01470

Experiment: monoculture; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 6
1,627,167	-		MIT1002_01469	0.47	-0.3
1,627,168	-		MIT1002_01469	0.47	-0.6
1,627,174	-		MIT1002_01469	0.47	+0.2
1,627,290	-		MIT1002_01469	0.54	+0.2
1,627,368	+		MIT1002_01469	0.58	+0.7
1,627,369	+		MIT1002_01469	0.58	+1.0
1,627,380	+		MIT1002_01469	0.58	-0.0
1,627,438	+		MIT1002_01469	0.62	+1.4
1,627,443	+		MIT1002_01469	0.62	-0.8
1,627,443	+		MIT1002_01469	0.62	-0.1
1,627,451	-		MIT1002_01469	0.62	+0.8
1,627,451	-		MIT1002_01469	0.62	+0.9
1,627,452	+		MIT1002_01469	0.62	-1.7
1,627,452	+		MIT1002_01469	0.62	-0.7
1,627,452	+		MIT1002_01469	0.62	+2.6
1,627,452	+		MIT1002_01469	0.62	+0.2
1,627,452	+		MIT1002_01469	0.62	-0.2
1,627,460	-		MIT1002_01469	0.63	+0.4
1,627,460	-		MIT1002_01469	0.63	-2.7
1,627,460	-		MIT1002_01469	0.63	+3.0
1,627,460	-		MIT1002_01469	0.63	-0.3
1,627,532	+		MIT1002_01469	0.67	+0.6
1,627,582	+		MIT1002_01469	0.69	+0.2
1,627,582	+		MIT1002_01469	0.69	+2.2
1,627,582	+		MIT1002_01469	0.69	-1.2
1,627,582	+		MIT1002_01469	0.69	-1.5
1,627,775	-		MIT1002_01469	0.80	+0.5
1,627,784	+		MIT1002_01469	0.80	-2.0
1,627,792	-		MIT1002_01469	0.81	-0.3
1,627,802	-		MIT1002_01469	0.81	+1.4
1,627,820	+		MIT1002_01469	0.82	+0.4
1,627,820	+		MIT1002_01469	0.82	+1.3
1,627,826	-		MIT1002_01469	0.83	+2.0
1,627,828	-		MIT1002_01469	0.83	+1.2
1,627,856	-		MIT1002_01469	0.84	+1.2
1,627,984	-				-2.6
1,627,985	-				-1.6
1,627,986	-				+0.2
1,628,011	+				+1.1
1,628,011	+				-1.6
1,628,019	-				+0.7
1,628,030	-				+0.4
1,628,098	-				+0.5
1,628,116	+				-0.5
1,628,149	+				+2.3
1,628,214	+		MIT1002_01470	0.10	-0.6
1,628,234	-		MIT1002_01470	0.14	-1.0
1,628,265	-		MIT1002_01470	0.20	-1.0
1,628,318	+		MIT1002_01470	0.29	-1.5
1,628,325	+		MIT1002_01470	0.31	+0.6
1,628,326	-		MIT1002_01470	0.31	+1.5
1,628,346	-		MIT1002_01470	0.35	+2.5
1,628,354	-		MIT1002_01470	0.36	+0.1
1,628,364	-		MIT1002_01470	0.38	-0.0
1,628,379	-		MIT1002_01470	0.41	-0.8
1,628,387	-		MIT1002_01470	0.42	-1.4
1,628,389	+		MIT1002_01470	0.43	+0.4
1,628,403	-		MIT1002_01470	0.45	-0.1
1,628,550	-		MIT1002_01470	0.72	-1.2
1,628,599	-		MIT1002_01470	0.81	+1.0
1,628,601	+		MIT1002_01470	0.82	-0.2
1,628,609	-		MIT1002_01470	0.83	-1.0
1,628,609	-		MIT1002_01470	0.83	-0.6
1,628,609	-		MIT1002_01470	0.83	+0.2
1,628,609	-		MIT1002_01470	0.83	+0.4
1,628,655	+				+0.2
1,628,664	-				+0.2
1,628,668	+				-0.6
1,628,668	+				+0.6
1,628,714	-				+1.1
1,628,763	-				+1.2
1,628,878	+		MIT1002_01471	0.22	-0.7
1,628,888	+		MIT1002_01471	0.25	-1.5
1,628,888	+		MIT1002_01471	0.25	+0.8
1,628,954	-		MIT1002_01471	0.42	-0.0
1,629,001	+		MIT1002_01471	0.54	+1.2
1,629,083	+		MIT1002_01471	0.75	+1.4
1,629,083	-		MIT1002_01471	0.75	-0.2
1,629,083	-		MIT1002_01471	0.75	-0.9
1,629,133	-		MIT1002_01471	0.87	+0.1
1,629,348	-		MIT1002_01472	0.14	+1.2
1,629,363	+		MIT1002_01472	0.17	+1.3
1,629,445	+		MIT1002_01472	0.36	+0.6
1,629,473	-		MIT1002_01472	0.42	+2.6
1,629,591	+		MIT1002_01472	0.68	-1.7
1,629,616	+		MIT1002_01472	0.74	-2.2