Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01408

Experiment: monoculture; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 6
1,553,220	+				+0.6
1,553,220	+				+0.0
1,553,220	+				+1.4
1,553,220	+				-0.4
1,553,220	+				-0.7
1,553,228	-				-1.6
1,553,228	-				+1.7
1,553,228	-				-0.9
1,553,524	-				+2.7
1,553,636	+				+3.1
1,553,637	-				+1.5
1,553,698	-				-0.1
1,553,728	+				-1.0
1,553,797	-				-0.4
1,553,809	-				+1.0
1,553,809	-				+1.0
1,553,872	+		MIT1002_01408	0.16	+0.8
1,553,970	-		MIT1002_01408	0.27	-1.1
1,553,973	+		MIT1002_01408	0.28	+0.2
1,553,975	+		MIT1002_01408	0.28	+0.7
1,554,070	+		MIT1002_01408	0.38	-0.4
1,554,083	-		MIT1002_01408	0.40	+1.5
1,554,168	+		MIT1002_01408	0.49	+0.9
1,554,205	-		MIT1002_01408	0.53	+0.0
1,554,205	-		MIT1002_01408	0.53	+0.3
1,554,218	-		MIT1002_01408	0.55	+0.2
1,554,262	+		MIT1002_01408	0.59	-0.0
1,554,263	-		MIT1002_01408	0.60	-0.8
1,554,270	-		MIT1002_01408	0.60	-0.7
1,554,270	-		MIT1002_01408	0.60	+0.5
1,554,270	-		MIT1002_01408	0.60	+0.3
1,554,275	-		MIT1002_01408	0.61	-0.7
1,554,315	+		MIT1002_01408	0.65	-0.3
1,554,433	+		MIT1002_01408	0.78	-0.2
1,554,441	+		MIT1002_01408	0.79	+0.5
1,554,441	+		MIT1002_01408	0.79	+2.9
1,554,441	-		MIT1002_01408	0.79	-0.2
1,554,454	-		MIT1002_01408	0.81	-0.4
1,554,510	-		MIT1002_01408	0.87	+0.2
1,554,511	-		MIT1002_01408	0.87	-0.3
1,554,531	+		MIT1002_01408	0.89	+0.9
1,554,531	+		MIT1002_01408	0.89	-1.4
1,554,538	+				+0.1
1,554,538	+				-0.7
1,554,571	-				-1.9
1,554,590	-				-2.8
1,554,590	-				+0.5
1,554,739	+		MIT1002_01409	0.23	-0.1
1,554,739	+		MIT1002_01409	0.23	-0.5
1,554,741	+		MIT1002_01409	0.24	+0.9
1,554,747	-		MIT1002_01409	0.27	-1.2
1,554,748	-		MIT1002_01409	0.27	+2.1
1,554,749	-		MIT1002_01409	0.27	+0.2
1,554,761	-		MIT1002_01409	0.33	+0.5
1,554,888	+				-0.4
1,554,925	+		MIT1002_01410	0.10	+1.2
1,554,925	+		MIT1002_01410	0.10	-0.4
1,554,925	+		MIT1002_01410	0.10	+0.1
1,554,925	+		MIT1002_01410	0.10	+0.6
1,554,925	+		MIT1002_01410	0.10	-0.9
1,554,925	+		MIT1002_01410	0.10	-1.4
1,554,925	+		MIT1002_01410	0.10	-1.7
1,554,925	+		MIT1002_01410	0.10	+0.6
1,554,933	-		MIT1002_01410	0.14	-1.0
1,554,933	-		MIT1002_01410	0.14	-1.3
1,554,933	-		MIT1002_01410	0.14	-1.8
1,554,933	-		MIT1002_01410	0.14	+0.7
1,554,933	-		MIT1002_01410	0.14	-1.9
1,554,933	-		MIT1002_01410	0.14	-0.0
1,554,956	+		MIT1002_01410	0.26	-1.0
1,554,968	+		MIT1002_01410	0.33	-1.5
1,555,075	+		MIT1002_01410	0.89	-1.0
1,555,084	-				-0.9
1,555,084	-				+0.7
1,555,092	-				-0.5
1,555,102	-				-0.0
1,555,164	+				+1.5
1,555,172	+				-0.5
1,555,276	+				+1.1
1,555,292	-				+1.7
1,555,404	+				+1.7
1,555,429	-				-2.5
1,555,450	-				-0.6
1,555,469	-				+1.1
1,555,536	+		MIT1002_01411	0.16	-0.5
1,555,579	-		MIT1002_01411	0.20	-1.1
1,555,593	+		MIT1002_01411	0.22	-0.2
1,555,612	-		MIT1002_01411	0.24	+1.4
1,555,612	-		MIT1002_01411	0.24	+0.0