Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01141

Experiment: monoculture; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 6
1,251,981	-				-2.1
1,253,042	-				-0.9
1,253,085	-				-2.1
1,253,085	-				-0.1
1,253,085	-				-0.3
1,253,179	-		MIT1002_01141	0.14	+0.0
1,253,184	-		MIT1002_01141	0.15	-2.0
1,253,199	-		MIT1002_01141	0.15	-0.5
1,253,199	-		MIT1002_01141	0.15	-0.9
1,253,223	-		MIT1002_01141	0.17	-1.7
1,253,250	+		MIT1002_01141	0.18	+1.2
1,253,268	-		MIT1002_01141	0.19	-0.8
1,253,268	-		MIT1002_01141	0.19	-0.4
1,253,268	-		MIT1002_01141	0.19	+2.2
1,253,319	+		MIT1002_01141	0.22	-0.3
1,253,407	-		MIT1002_01141	0.27	-2.6
1,253,539	-		MIT1002_01141	0.35	-2.0
1,253,621	-		MIT1002_01141	0.39	-1.5
1,253,760	-		MIT1002_01141	0.47	-1.5
1,253,760	-		MIT1002_01141	0.47	+0.0
1,253,778	+		MIT1002_01141	0.48	+0.6
1,253,786	-		MIT1002_01141	0.49	-2.8
1,253,786	-		MIT1002_01141	0.49	-0.9
1,253,786	-		MIT1002_01141	0.49	+0.8
1,253,820	+		MIT1002_01141	0.51	+0.9
1,253,826	-		MIT1002_01141	0.51	-0.7
1,253,826	-		MIT1002_01141	0.51	+0.9
1,253,868	-		MIT1002_01141	0.53	+0.1
1,253,924	-		MIT1002_01141	0.57	-0.3
1,254,050	-		MIT1002_01141	0.64	-0.5
1,254,050	-		MIT1002_01141	0.64	+1.9
1,254,050	-		MIT1002_01141	0.64	+0.4
1,254,309	-		MIT1002_01141	0.78	-1.0
1,254,422	+		MIT1002_01141	0.85	-0.9
1,254,615	+				-0.6
1,254,623	-				-0.3
1,254,754	-				+0.7
1,254,754	-				-0.6
1,254,793	-				+0.8
1,254,874	-		MIT1002_01142	0.16	+0.9
1,254,918	+		MIT1002_01142	0.20	-0.1
1,254,959	+		MIT1002_01142	0.24	-2.4
1,254,985	-		MIT1002_01142	0.26	+0.0
1,254,990	-		MIT1002_01142	0.27	-0.1
1,255,087	-		MIT1002_01142	0.35	+1.6
1,255,093	+		MIT1002_01142	0.36	+0.6
1,255,122	-		MIT1002_01142	0.38	+0.1
1,255,129	+		MIT1002_01142	0.39	-2.1
1,255,150	+		MIT1002_01142	0.41	-0.3
1,255,160	-		MIT1002_01142	0.42	+0.6
1,255,176	+		MIT1002_01142	0.43	-1.6
1,255,221	-		MIT1002_01142	0.47	+0.2
1,255,231	+		MIT1002_01142	0.48	-0.9
1,255,324	+		MIT1002_01142	0.56	+0.8
1,255,370	+		MIT1002_01142	0.61	-2.1
1,255,464	+		MIT1002_01142	0.69	-0.9
1,255,464	+		MIT1002_01142	0.69	+1.1
1,255,515	+		MIT1002_01142	0.73	+0.9
1,255,544	-		MIT1002_01142	0.76	+0.2
1,255,593	-		MIT1002_01142	0.80	-0.5
1,255,600	+		MIT1002_01142	0.81	-1.6
1,255,608	-		MIT1002_01142	0.82	+0.9
1,255,628	-		MIT1002_01142	0.84	-0.5
1,255,649	+		MIT1002_01142	0.85	-1.5