Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01136

Experiment: monoculture; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 6
1,246,948	+		MIT1002_01135	0.47	-0.9
1,246,957	-		MIT1002_01135	0.48	-1.1
1,247,211	-		MIT1002_01135	0.62	-0.6
1,247,233	+		MIT1002_01135	0.63	-0.8
1,247,272	-		MIT1002_01135	0.65	-1.2
1,247,298	-		MIT1002_01135	0.66	-2.0
1,247,308	+		MIT1002_01135	0.67	+0.6
1,247,318	-		MIT1002_01135	0.67	-0.4
1,247,320	-		MIT1002_01135	0.68	-2.9
1,247,397	-		MIT1002_01135	0.72	-0.5
1,247,397	-		MIT1002_01135	0.72	-2.6
1,247,447	+		MIT1002_01135	0.75	-2.2
1,247,447	+		MIT1002_01135	0.75	-2.0
1,247,490	+		MIT1002_01135	0.77	-2.3
1,247,502	+		MIT1002_01135	0.78	+0.3
1,247,510	-		MIT1002_01135	0.78	-0.7
1,247,512	+		MIT1002_01135	0.78	-0.7
1,247,545	-		MIT1002_01135	0.80	-1.7
1,247,545	-		MIT1002_01135	0.80	-0.2
1,247,545	-		MIT1002_01135	0.80	+0.7
1,247,545	-		MIT1002_01135	0.80	-1.4
1,247,588	+		MIT1002_01135	0.82	+1.3
1,247,604	-		MIT1002_01135	0.83	-0.7
1,247,609	-		MIT1002_01135	0.83	+0.1
1,247,622	+		MIT1002_01135	0.84	-1.4
1,247,648	+		MIT1002_01135	0.86	-2.5
1,247,686	+		MIT1002_01135	0.88	-0.4
1,247,704	-		MIT1002_01135	0.89	-1.6
1,247,855	+				+1.1
1,247,865	+				+0.7
1,247,868	-				-1.6
1,247,872	+				-0.5
1,247,880	-				+0.6
1,247,890	-				-0.4
1,247,905	+				-1.2
1,247,910	+				+0.2
1,247,942	+				+0.9
1,247,950	+				-0.9
1,247,958	+				-0.5
1,248,046	-		MIT1002_01136	0.11	-1.2
1,248,086	-		MIT1002_01136	0.14	-0.5
1,248,241	+		MIT1002_01136	0.28	-1.1
1,248,249	-		MIT1002_01136	0.29	-1.5
1,248,257	-		MIT1002_01136	0.30	-1.4
1,248,429	+		MIT1002_01136	0.45	-1.2
1,248,457	-		MIT1002_01136	0.47	-0.6
1,248,516	+		MIT1002_01136	0.53	+0.0
1,248,516	+		MIT1002_01136	0.53	+0.1
1,248,534	-		MIT1002_01136	0.54	-1.7
1,248,582	+		MIT1002_01136	0.59	+0.1
1,248,615	+		MIT1002_01136	0.62	-0.1
1,248,649	+		MIT1002_01136	0.65	-0.8
1,248,732	+		MIT1002_01136	0.72	-2.9
1,248,757	+		MIT1002_01136	0.74	-0.9
1,248,817	+		MIT1002_01136	0.80	-0.5
1,248,823	+		MIT1002_01136	0.80	-1.1
1,248,891	-		MIT1002_01136	0.86	-1.4
1,248,932	+		MIT1002_01136	0.90	-2.5
1,248,977	+				+0.1
1,248,985	-				+1.8
1,248,994	+				+0.5
1,248,994	+				-0.8
1,249,002	-				+1.2
1,249,007	-				+1.5
1,249,155	-				+2.1
1,249,175	-				+1.2
1,249,277	+				-0.3
1,250,035	-				-1.4