Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01113

Experiment: monoculture; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 6
1,219,334	+				-2.1
1,219,334	+				-2.8
1,219,334	+				-2.0
1,219,334	+				-1.4
1,219,349	-				-2.3
1,219,368	+				-4.4
1,219,383	-				-1.5
1,219,384	-				-2.9
1,219,384	-				-2.0
1,219,408	-				-1.4
1,219,423	-				-1.4
1,219,449	+				-4.2
1,219,449	+				-3.5
1,219,454	+				+0.9
1,219,536	+		MIT1002_01112	0.17	-0.7
1,219,558	-		MIT1002_01112	0.19	-1.1
1,219,636	-		MIT1002_01112	0.27	+0.9
1,219,684	+		MIT1002_01112	0.32	-1.5
1,219,737	-		MIT1002_01112	0.38	-2.3
1,219,786	+		MIT1002_01112	0.43	-5.5
1,219,794	-		MIT1002_01112	0.44	-2.4
1,219,794	-		MIT1002_01112	0.44	-3.6
1,219,901	-		MIT1002_01112	0.55	-2.1
1,219,982	+		MIT1002_01112	0.64	-5.5
1,219,988	-		MIT1002_01112	0.65	-1.7
1,220,210	-		MIT1002_01112	0.88	-4.4
1,220,272	-				+0.9
1,220,286	-				-0.5
1,220,286	-				-1.6
1,220,314	+				+0.6
1,220,378	-				-1.3
1,220,401	-				-0.7
1,220,418	-				-0.4
1,220,489	-		MIT1002_01113	0.16	-0.2
1,220,593	-		MIT1002_01113	0.25	+0.1
1,220,628	+		MIT1002_01113	0.29	-0.7
1,220,635	-		MIT1002_01113	0.29	-0.8
1,220,704	-		MIT1002_01113	0.36	-1.1
1,220,727	+		MIT1002_01113	0.38	-1.3
1,220,759	+		MIT1002_01113	0.41	+2.3
1,220,778	-		MIT1002_01113	0.43	+0.4
1,220,838	-		MIT1002_01113	0.48	-1.1
1,220,950	-		MIT1002_01113	0.59	-1.1
1,221,042	+		MIT1002_01113	0.67	-0.2
1,221,090	+		MIT1002_01113	0.72	-0.3
1,221,090	+		MIT1002_01113	0.72	+0.3
1,221,152	+		MIT1002_01113	0.78	-0.9
1,221,152	+		MIT1002_01113	0.78	-1.1
1,221,160	-		MIT1002_01113	0.78	-0.4
1,221,160	-		MIT1002_01113	0.78	-1.9
1,221,160	-		MIT1002_01113	0.78	-0.8
1,221,230	+		MIT1002_01113	0.85	+0.5
1,221,236	+		MIT1002_01113	0.86	-0.2
1,221,244	-		MIT1002_01113	0.86	-0.7
1,221,244	-		MIT1002_01113	0.86	-2.4
1,221,277	+		MIT1002_01113	0.89	-1.1
1,221,324	-				+0.9
1,221,367	+				-0.6
1,221,384	+				-0.1
1,221,392	-				+0.9
1,221,525	+				+0.5
1,221,535	+				-0.8
1,221,577	+				+0.3
1,221,577	+				-1.1
1,221,585	-				-0.1
1,221,585	-				+0.7
1,221,588	+				+0.2
1,221,624	-				-0.5
1,221,630	-				+1.5
1,221,684	+		MIT1002_01114	0.11	+1.3
1,221,684	+		MIT1002_01114	0.11	-1.0
1,221,685	+		MIT1002_01114	0.11	-1.4
1,221,686	+		MIT1002_01114	0.11	+0.1
1,221,692	-		MIT1002_01114	0.11	+0.2
1,221,814	+		MIT1002_01114	0.16	+0.6
1,221,824	+		MIT1002_01114	0.16	-2.5
1,221,865	+		MIT1002_01114	0.18	+1.0
1,221,868	-		MIT1002_01114	0.18	+0.4
1,221,873	-		MIT1002_01114	0.18	+1.5
1,221,954	-		MIT1002_01114	0.21	-0.4
1,221,954	-		MIT1002_01114	0.21	+1.2
1,222,084	+		MIT1002_01114	0.26	-0.7
1,222,087	-		MIT1002_01114	0.26	-0.8
1,222,116	+		MIT1002_01114	0.27	-0.6
1,222,125	+		MIT1002_01114	0.28	-0.3
1,222,133	-		MIT1002_01114	0.28	-0.2
1,222,133	-		MIT1002_01114	0.28	-0.5
1,222,265	+		MIT1002_01114	0.33	-0.2
1,222,307	-		MIT1002_01114	0.35	-0.9