Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01099

Experiment: monoculture; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 6
1,205,435	-				-1.2
1,205,445	+				-0.2
1,205,445	+				+0.5
1,205,445	+				-1.5
1,205,453	-				-0.5
1,205,453	-				-1.2
1,205,453	-				-2.0
1,205,615	-		MIT1002_01098	0.24	+1.1
1,205,620	+		MIT1002_01098	0.24	+1.2
1,205,625	+		MIT1002_01098	0.25	+0.9
1,205,628	-		MIT1002_01098	0.25	-2.6
1,205,628	-		MIT1002_01098	0.25	-0.6
1,205,676	+		MIT1002_01098	0.29	-1.0
1,205,704	+		MIT1002_01098	0.32	-1.1
1,205,704	+		MIT1002_01098	0.32	-0.7
1,205,705	-		MIT1002_01098	0.32	+0.4
1,205,729	+		MIT1002_01098	0.34	-1.0
1,205,729	+		MIT1002_01098	0.34	-2.9
1,205,781	+		MIT1002_01098	0.39	-2.4
1,205,833	-		MIT1002_01098	0.43	+0.6
1,205,897	+		MIT1002_01098	0.49	-1.2
1,205,905	-		MIT1002_01098	0.50	-1.0
1,205,913	-		MIT1002_01098	0.50	+0.5
1,206,016	+		MIT1002_01098	0.60	-1.1
1,206,090	-		MIT1002_01098	0.66	-0.2
1,206,137	-		MIT1002_01098	0.70	+1.0
1,206,171	+		MIT1002_01098	0.73	+0.9
1,206,320	-		MIT1002_01098	0.87	+0.4
1,206,407	-				-1.7
1,206,411	-				+0.0
1,206,463	+				-1.7
1,206,468	+				-1.0
1,206,563	-		MIT1002_01099	0.64	+1.5
1,206,618	-		MIT1002_01099	0.84	-1.0
1,206,691	-				+0.6
1,206,697	-				+1.5
1,206,717	-				+0.5
1,206,727	-				+0.1
1,206,727	-				+0.1
1,206,757	+				-0.1
1,206,766	+				+1.2
1,206,897	-				-0.6
1,206,909	-				-2.2
1,206,909	-				-0.1
1,206,976	+				+1.0
1,206,994	+				-0.1
1,207,070	-				-0.2
1,207,072	+				-1.3
1,207,177	-		MIT1002_01100	0.13	-4.1
1,207,189	+		MIT1002_01100	0.14	-0.5
1,207,363	+		MIT1002_01100	0.22	-2.2
1,207,425	+		MIT1002_01100	0.25	-0.0
1,207,455	-		MIT1002_01100	0.26	+0.0
1,207,464	+		MIT1002_01100	0.27	-0.9
1,207,554	+		MIT1002_01100	0.31	-1.5
1,207,633	+		MIT1002_01100	0.35	+0.7
1,207,644	+		MIT1002_01100	0.35	-1.4