Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01026

Experiment: monoculture; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 6
1,135,843	-				-2.4
1,135,883	+				-0.5
1,135,894	-				+0.4
1,135,896	+				-0.1
1,135,943	+				-1.1
1,135,943	+				+0.4
1,135,951	-				+1.0
1,135,971	+				-0.1
1,135,976	+				+1.3
1,135,978	+				+0.9
1,135,978	+				-0.8
1,136,066	-		MIT1002_01025	0.66	+0.9
1,136,066	-		MIT1002_01025	0.66	+1.0
1,136,204	+				+0.1
1,136,305	-				+0.0
1,136,331	+				+0.4
1,136,356	+				+1.0
1,136,411	-				-1.0
1,136,411	-				+0.6
1,136,452	+				-0.3
1,136,460	-				-0.6
1,136,460	-				+0.0
1,136,484	+				-1.5
1,136,519	-				-0.3
1,136,551	-		MIT1002_01026	0.12	-0.1
1,136,558	-		MIT1002_01026	0.12	+1.6
1,136,584	-		MIT1002_01026	0.14	-0.6
1,136,666	+		MIT1002_01026	0.20	+0.9
1,136,674	-		MIT1002_01026	0.21	+0.4
1,136,718	+		MIT1002_01026	0.24	-0.2
1,136,726	-		MIT1002_01026	0.24	+0.7
1,136,775	+		MIT1002_01026	0.28	-0.8
1,136,797	+		MIT1002_01026	0.29	+0.9
1,136,851	-		MIT1002_01026	0.33	-0.0
1,136,876	-		MIT1002_01026	0.35	-0.7
1,136,878	-		MIT1002_01026	0.35	-0.3
1,136,991	+		MIT1002_01026	0.43	-2.1
1,136,999	-		MIT1002_01026	0.44	+0.1
1,137,025	-		MIT1002_01026	0.46	-0.1
1,137,036	+		MIT1002_01026	0.46	-0.6
1,137,074	+		MIT1002_01026	0.49	-0.3
1,137,082	-		MIT1002_01026	0.50	-0.7
1,137,126	+		MIT1002_01026	0.53	+0.0
1,137,152	-		MIT1002_01026	0.55	-0.7
1,137,168	+		MIT1002_01026	0.56	-2.2
1,137,177	-		MIT1002_01026	0.56	+0.6
1,137,357	+		MIT1002_01026	0.69	-2.3
1,137,422	-		MIT1002_01026	0.74	-0.1
1,137,522	+		MIT1002_01026	0.81	+0.4
1,137,522	+		MIT1002_01026	0.81	+2.1
1,137,565	-		MIT1002_01026	0.84	-0.2
1,137,648	+		MIT1002_01026	0.90	-0.7
1,137,658	-				-0.4
1,137,711	+				+0.2
1,137,718	+				+1.5
1,137,786	+				+0.3
1,137,786	+				+0.6
1,137,799	-				-1.6
1,137,862	-				-2.7
1,137,864	-				-1.3
1,137,879	-				+0.2
1,137,921	-				-2.0
1,137,975	-				-2.3
1,137,999	-				-2.1
1,138,141	-				+0.9
1,138,161	+				-1.4
1,138,198	-				-4.8
1,138,226	-				-0.9
1,138,233	-				-1.9
1,138,281	+				-1.4
1,138,370	+		MIT1002_01027	0.10	-0.5
1,138,380	+		MIT1002_01027	0.11	-2.9
1,138,444	+		MIT1002_01027	0.12	-3.5
1,138,452	-		MIT1002_01027	0.12	-0.4
1,138,541	-		MIT1002_01027	0.15	-2.7
1,138,603	+		MIT1002_01027	0.16	+0.2
1,138,603	+		MIT1002_01027	0.16	-2.0
1,138,638	+		MIT1002_01027	0.17	-4.1