Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS13310

Experiment: biofilm; Day1; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Aluminum chloride 1mM
2,932,982	+		LRK53_RS13300	0.53	-1.1
2,932,982	+		LRK53_RS13300	0.53	-0.4
2,932,983	-		LRK53_RS13300	0.53	-1.0
2,932,983	-		LRK53_RS13300	0.53	-0.4
2,932,983	-		LRK53_RS13300	0.53	-1.0
2,932,983	-		LRK53_RS13300	0.53	+1.1
2,932,983	-		LRK53_RS13300	0.53	+0.6
2,933,242	+		LRK53_RS13300	0.78	-2.3
2,933,279	+		LRK53_RS13300	0.82	+1.0
2,933,279	+		LRK53_RS13300	0.82	+0.6
2,933,279	+		LRK53_RS13300	0.82	-1.7
2,933,279	+		LRK53_RS13300	0.82	-0.4
2,933,280	-		LRK53_RS13300	0.82	-0.5
2,933,280	-		LRK53_RS13300	0.82	-1.1
2,933,280	-		LRK53_RS13300	0.82	+0.2
2,933,280	-		LRK53_RS13300	0.82	+1.1
2,933,280	-		LRK53_RS13300	0.82	+1.5
2,933,457	-				-0.7
2,933,457	-				-2.1
2,933,468	+				+1.0
2,933,468	+				+0.6
2,933,468	+				-1.4
2,933,468	+				+0.9
2,933,468	+				-0.2
2,933,469	-				-0.2
2,933,469	-				+0.3
2,933,469	-				-1.1
2,933,493	+				-0.6
2,933,496	+				+0.9
2,933,497	-				+1.1
2,933,517	+				-1.7
2,933,517	+				-1.1
2,933,517	+				-0.8
2,933,518	-				-0.5
2,933,518	-				-0.6
2,933,564	+				+0.3
2,933,595	+		LRK53_RS13305	0.21	-0.8
2,933,595	+		LRK53_RS13305	0.21	-1.7
2,933,595	+		LRK53_RS13305	0.21	+0.8
2,933,595	+		LRK53_RS13305	0.21	-3.2
2,933,595	+		LRK53_RS13305	0.21	-0.8
2,933,596	-		LRK53_RS13305	0.21	-0.3
2,933,596	-		LRK53_RS13305	0.21	-3.1
2,933,669	-		LRK53_RS13305	0.57	-1.0
2,933,685	+		LRK53_RS13305	0.65	-0.8
2,933,685	+		LRK53_RS13305	0.65	-2.0
2,933,685	+		LRK53_RS13305	0.65	-0.5
2,933,685	+		LRK53_RS13305	0.65	-1.9
2,933,685	+		LRK53_RS13305	0.65	-1.0
2,933,685	+		LRK53_RS13305	0.65	-3.0
2,933,685	+		LRK53_RS13305	0.65	-2.5
2,933,685	+		LRK53_RS13305	0.65	-0.9
2,933,686	-		LRK53_RS13305	0.65	-2.2
2,933,686	-		LRK53_RS13305	0.65	+0.3
2,933,754	+				+0.2
2,933,755	-				-0.5
2,933,804	+				-0.8
2,933,805	-				-0.8
2,933,937	+				-0.2
2,933,937	+				+0.1
2,933,937	+				+0.1
2,933,937	+				-0.0
2,933,937	+				-1.7
2,933,938	-				-1.0
2,933,938	-				-1.4
2,933,938	-				-3.7
2,933,938	-				-1.2
2,933,964	+				-0.7
2,933,964	+				-0.7
2,933,964	+				-0.8
2,933,964	+				-1.3
2,933,964	+				+0.3
2,933,964	+				-1.7
2,933,964	+				-0.6
2,933,964	+				+0.0
2,933,964	+				+0.3
2,933,964	+				-0.4
2,933,964	+				+0.3
2,933,965	-				-0.3
2,933,965	-				-2.2
2,933,965	-				-1.7
2,933,965	-				-1.0
2,933,965	-				-1.1
2,933,965	-				-0.7
2,933,965	-				+0.4
2,933,967	+				-1.8
2,933,968	-				+1.2
2,933,968	-				+1.4
2,933,968	-				+1.4
2,934,054	+				-0.3
2,934,054	+				-0.4
2,934,055	-				+1.2
2,934,055	-				-0.2
2,934,055	-				-0.0
2,934,055	-				-0.7
2,934,058	+				-1.8
2,934,059	-				+0.3
2,934,059	-				-0.4
2,934,059	-				-0.8
2,934,078	+		LRK53_RS13310	0.11	-2.4
2,934,086	+		LRK53_RS13310	0.12	+0.1
2,934,086	+		LRK53_RS13310	0.12	-0.9
2,934,103	+		LRK53_RS13310	0.14	-1.9
2,934,104	-		LRK53_RS13310	0.14	-0.0
2,934,104	-		LRK53_RS13310	0.14	-1.4
2,934,104	-		LRK53_RS13310	0.14	-2.5
2,934,104	-		LRK53_RS13310	0.14	-0.4
2,934,119	+		LRK53_RS13310	0.15	+0.5
2,934,119	+		LRK53_RS13310	0.15	+0.3
2,934,119	+		LRK53_RS13310	0.15	-0.2
2,934,119	+		LRK53_RS13310	0.15	-2.0
2,934,120	-		LRK53_RS13310	0.15	+1.3
2,934,120	-		LRK53_RS13310	0.15	-1.2
2,934,120	-		LRK53_RS13310	0.15	-2.6
2,934,120	-		LRK53_RS13310	0.15	-0.7
2,934,120	-		LRK53_RS13310	0.15	-1.8
2,934,158	+		LRK53_RS13310	0.19	-0.1
2,934,158	+		LRK53_RS13310	0.19	+0.5
2,934,158	+		LRK53_RS13310	0.19	-1.2
2,934,159	-		LRK53_RS13310	0.19	+1.6
2,934,159	-		LRK53_RS13310	0.19	+0.3
2,934,159	-		LRK53_RS13310	0.19	+0.3
2,934,159	-		LRK53_RS13310	0.19	-2.1
2,934,159	-		LRK53_RS13310	0.19	-1.0
2,934,162	+		LRK53_RS13310	0.20	+0.6
2,934,162	+		LRK53_RS13310	0.20	-0.2
2,934,162	+		LRK53_RS13310	0.20	-1.7
2,934,163	-		LRK53_RS13310	0.20	-1.0
2,934,163	-		LRK53_RS13310	0.20	+0.4
2,934,163	-		LRK53_RS13310	0.20	-0.9
2,934,190	+		LRK53_RS13310	0.22	-1.2
2,934,190	+		LRK53_RS13310	0.22	-1.0
2,934,222	+		LRK53_RS13310	0.26	-1.4
2,934,222	+		LRK53_RS13310	0.26	-0.0
2,934,222	+		LRK53_RS13310	0.26	+0.5
2,934,222	+		LRK53_RS13310	0.26	-2.1
2,934,222	+		LRK53_RS13310	0.26	-2.5
2,934,222	+		LRK53_RS13310	0.26	-3.2
2,934,222	+		LRK53_RS13310	0.26	-0.0
2,934,223	-		LRK53_RS13310	0.26	+0.0
2,934,223	-		LRK53_RS13310	0.26	-0.2
2,934,223	-		LRK53_RS13310	0.26	+0.7
2,934,223	-		LRK53_RS13310	0.26	-1.4
2,934,223	-		LRK53_RS13310	0.26	+0.2
2,934,223	-		LRK53_RS13310	0.26	-0.4
2,934,223	-		LRK53_RS13310	0.26	+0.2
2,934,254	-		LRK53_RS13310	0.29	-0.9
2,934,294	+		LRK53_RS13310	0.33	-1.0
2,934,309	+		LRK53_RS13310	0.34	-0.7
2,934,309	+		LRK53_RS13310	0.34	-0.7
2,934,309	+		LRK53_RS13310	0.34	-0.7
2,934,309	+		LRK53_RS13310	0.34	+1.6
2,934,310	-		LRK53_RS13310	0.34	-3.6
2,934,310	-		LRK53_RS13310	0.34	-0.5
2,934,356	+		LRK53_RS13310	0.39	-0.3
2,934,356	+		LRK53_RS13310	0.39	-0.4
2,934,356	+		LRK53_RS13310	0.39	+1.8
2,934,356	+		LRK53_RS13310	0.39	-1.2
2,934,357	-		LRK53_RS13310	0.39	-1.4
2,934,357	-		LRK53_RS13310	0.39	-0.3
2,934,357	-		LRK53_RS13310	0.39	+1.8
2,934,357	-		LRK53_RS13310	0.39	-0.8
2,934,394	+		LRK53_RS13310	0.43	-0.7
2,934,395	-		LRK53_RS13310	0.43	-0.3
2,934,395	-		LRK53_RS13310	0.43	-2.0
2,934,410	+		LRK53_RS13310	0.44	-0.4
2,934,411	-		LRK53_RS13310	0.44	-2.0
2,934,411	-		LRK53_RS13310	0.44	+0.1
2,934,411	-		LRK53_RS13310	0.44	-0.7
2,934,418	+		LRK53_RS13310	0.45	+0.0
2,934,418	+		LRK53_RS13310	0.45	-2.0
2,934,419	-		LRK53_RS13310	0.45	-0.8
2,934,419	-		LRK53_RS13310	0.45	-0.9
2,934,434	+		LRK53_RS13310	0.47	-1.4
2,934,434	+		LRK53_RS13310	0.47	-0.0
2,934,434	+		LRK53_RS13310	0.47	-1.8
2,934,434	+		LRK53_RS13310	0.47	+0.6
2,934,434	+		LRK53_RS13310	0.47	-2.7
2,934,434	+		LRK53_RS13310	0.47	+0.8
2,934,434	+		LRK53_RS13310	0.47	-0.6
2,934,434	+		LRK53_RS13310	0.47	-1.7
2,934,434	+		LRK53_RS13310	0.47	-1.0
2,934,434	+		LRK53_RS13310	0.47	+0.4
2,934,434	+		LRK53_RS13310	0.47	-0.9
2,934,434	+		LRK53_RS13310	0.47	-0.8
2,934,434	+		LRK53_RS13310	0.47	-0.0
2,934,434	+		LRK53_RS13310	0.47	-0.3
2,934,434	+		LRK53_RS13310	0.47	-1.8
2,934,434	+		LRK53_RS13310	0.47	-0.5
2,934,434	+		LRK53_RS13310	0.47	+0.6
2,934,434	+		LRK53_RS13310	0.47	-0.7
2,934,434	+		LRK53_RS13310	0.47	-0.5
2,934,435	-		LRK53_RS13310	0.47	-0.4
2,934,435	-		LRK53_RS13310	0.47	-0.5
2,934,435	-		LRK53_RS13310	0.47	-0.5
2,934,435	-		LRK53_RS13310	0.47	+1.8
2,934,435	-		LRK53_RS13310	0.47	-0.1
2,934,435	-		LRK53_RS13310	0.47	-1.7
2,934,435	-		LRK53_RS13310	0.47	+0.3
2,934,435	-		LRK53_RS13310	0.47	-1.3
2,934,435	-		LRK53_RS13310	0.47	+0.6
2,934,435	-		LRK53_RS13310	0.47	+0.6
2,934,435	-		LRK53_RS13310	0.47	-0.4
2,934,435	-		LRK53_RS13310	0.47	+0.2
2,934,435	-		LRK53_RS13310	0.47	-0.2
2,934,435	-		LRK53_RS13310	0.47	-3.1
2,934,435	-		LRK53_RS13310	0.47	-0.8
2,934,435	-		LRK53_RS13310	0.47	-3.4
2,934,435	-		LRK53_RS13310	0.47	-1.1
2,934,435	-		LRK53_RS13310	0.47	-1.1
2,934,435	-		LRK53_RS13310	0.47	-0.9
2,934,435	-		LRK53_RS13310	0.47	-2.0
2,934,438	+		LRK53_RS13310	0.47	-0.8
2,934,438	+		LRK53_RS13310	0.47	-0.5
2,934,438	+		LRK53_RS13310	0.47	+0.5
2,934,438	+		LRK53_RS13310	0.47	+2.8
2,934,438	+		LRK53_RS13310	0.47	-0.5
2,934,438	+		LRK53_RS13310	0.47	-1.2
2,934,439	-		LRK53_RS13310	0.47	-0.7
2,934,439	-		LRK53_RS13310	0.47	-0.5
2,934,439	-		LRK53_RS13310	0.47	-0.0
2,934,456	-		LRK53_RS13310	0.49	-0.4
2,934,512	+		LRK53_RS13310	0.54	-0.7
2,934,512	+		LRK53_RS13310	0.54	-0.8
2,934,512	+		LRK53_RS13310	0.54	-0.8
2,934,512	+		LRK53_RS13310	0.54	+0.6
2,934,512	+		LRK53_RS13310	0.54	-1.0
2,934,512	+		LRK53_RS13310	0.54	-1.7
2,934,512	+		LRK53_RS13310	0.54	-0.5
2,934,512	+		LRK53_RS13310	0.54	-1.7
2,934,512	+		LRK53_RS13310	0.54	+0.1
2,934,512	+		LRK53_RS13310	0.54	-0.5
2,934,512	+		LRK53_RS13310	0.54	-0.7
2,934,513	-		LRK53_RS13310	0.55	+1.4
2,934,513	-		LRK53_RS13310	0.55	-0.7
2,934,513	-		LRK53_RS13310	0.55	+0.6
2,934,513	-		LRK53_RS13310	0.55	-1.8
2,934,513	-		LRK53_RS13310	0.55	-3.2
2,934,513	-		LRK53_RS13310	0.55	-2.5
2,934,513	-		LRK53_RS13310	0.55	-2.5
2,934,513	-		LRK53_RS13310	0.55	-0.5
2,934,513	-		LRK53_RS13310	0.55	-0.9
2,934,513	-		LRK53_RS13310	0.55	-1.0
2,934,513	-		LRK53_RS13310	0.55	-1.0
2,934,514	+		LRK53_RS13310	0.55	+0.2
2,934,514	+		LRK53_RS13310	0.55	-1.2
2,934,514	+		LRK53_RS13310	0.55	+0.5
2,934,514	+		LRK53_RS13310	0.55	+0.1
2,934,514	+		LRK53_RS13310	0.55	-2.1
2,934,515	-		LRK53_RS13310	0.55	+0.5
2,934,515	-		LRK53_RS13310	0.55	+1.3
2,934,515	-		LRK53_RS13310	0.55	-1.0
2,934,515	-		LRK53_RS13310	0.55	-0.0
2,934,597	+		LRK53_RS13310	0.63	-0.7
2,934,598	-		LRK53_RS13310	0.63	-1.4
2,934,598	-		LRK53_RS13310	0.63	-1.1
2,934,598	-		LRK53_RS13310	0.63	-1.2
2,934,723	+		LRK53_RS13310	0.76	-1.0
2,934,723	+		LRK53_RS13310	0.76	+1.6
2,934,723	+		LRK53_RS13310	0.76	+0.7
2,934,723	+		LRK53_RS13310	0.76	-0.0
2,934,723	+		LRK53_RS13310	0.76	-0.1
2,934,723	+		LRK53_RS13310	0.76	+0.7
2,934,723	+		LRK53_RS13310	0.76	+0.1
2,934,724	-		LRK53_RS13310	0.76	+2.8
2,934,724	-		LRK53_RS13310	0.76	-0.2
2,934,724	-		LRK53_RS13310	0.76	+2.1
2,934,724	-		LRK53_RS13310	0.76	-1.4
2,934,724	-		LRK53_RS13310	0.76	-0.2
2,934,724	-		LRK53_RS13310	0.76	+0.2
2,934,724	-		LRK53_RS13310	0.76	+0.3
2,934,797	-		LRK53_RS13310	0.83	-0.5
2,934,797	-		LRK53_RS13310	0.83	-1.7
2,934,797	-		LRK53_RS13310	0.83	-1.0
2,934,822	+		LRK53_RS13310	0.85	-2.5
2,934,822	+		LRK53_RS13310	0.85	+1.7
2,934,822	+		LRK53_RS13310	0.85	-1.4
2,934,823	-		LRK53_RS13310	0.86	-0.7
2,934,858	+		LRK53_RS13310	0.89	-1.3
2,934,858	+		LRK53_RS13310	0.89	-0.6
2,934,859	-		LRK53_RS13310	0.89	+1.0
2,934,859	-		LRK53_RS13310	0.89	-1.3
2,934,859	-		LRK53_RS13310	0.89	-1.2
2,934,921	+				+1.0
2,934,921	+				-3.2
2,934,921	+				-0.4
2,934,921	+				-0.1
2,934,922	-				-1.7
2,934,922	-				+1.7
2,934,922	-				-1.2
2,934,922	-				-2.7
2,934,922	-				+0.2
2,934,922	-				+1.1
2,934,957	+				-2.1
2,934,957	+				+0.2
2,934,957	+				+1.1
2,934,957	+				+0.6
2,934,957	+				-1.7
2,934,957	+				+0.2
2,934,957	+				-1.1
2,934,958	-				-0.7
2,934,958	-				-1.2
2,934,958	-				-0.6
2,934,958	-				-1.4
2,934,958	-				-0.6
2,934,969	+				+0.1
2,934,969	+				-1.5
2,934,969	+				-0.6
2,934,969	+				-1.0
2,934,970	-				-0.2
2,934,970	-				-1.4
2,934,970	-				+0.9
2,934,970	-				+0.9
2,934,997	+				-0.9
2,935,020	+				-0.5
2,935,020	+				-0.1
2,935,021	-				-1.2
2,935,021	-				-0.6
2,935,021	-				-1.0
2,935,021	-				+1.4
2,935,021	-				-0.8
2,935,027	+				-1.4
2,935,027	+				-1.5
2,935,027	+				-1.8
2,935,027	+				-2.0
2,935,027	+				-1.9
2,935,027	+				-1.5
2,935,028	-				-0.5
2,935,028	-				-0.7
2,935,028	-				+0.2
2,935,064	+				-0.7
2,935,065	-				-0.4
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2,935,192	-				-1.3
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2,935,775	-		LRK53_RS13315	0.23	-0.9
2,935,775	-		LRK53_RS13315	0.23	-0.2
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2,935,775	-		LRK53_RS13315	0.23	-0.0
2,935,775	-		LRK53_RS13315	0.23	+1.3
2,935,775	-		LRK53_RS13315	0.23	-0.6
2,935,947	+		LRK53_RS13315	0.48	-0.2