Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS10180

Experiment: biofilm; Day1; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Aluminum chloride 1mM
2,273,160	+				+0.1
2,273,268	+				+0.3
2,273,268	+				-0.9
2,273,268	+				+1.0
2,273,268	+				-1.2
2,273,269	-				+0.4
2,273,373	+				-1.1
2,273,373	+				+0.0
2,273,373	+				-0.7
2,273,374	-				-0.8
2,273,374	-				-2.5
2,273,422	-				-0.6
2,273,455	-				-0.4
2,273,495	+				+0.5
2,273,495	+				-0.8
2,273,495	+				-0.9
2,273,495	+				-1.4
2,273,495	+				-0.6
2,273,495	+				-3.9
2,273,495	+				-2.2
2,273,495	+				-0.4
2,273,496	-				-1.5
2,273,496	-				+0.7
2,273,496	-				-0.9
2,273,496	-				-2.4
2,273,496	-				-2.0
2,273,496	-				-0.9
2,273,496	-				-1.9
2,273,496	-				-1.1
2,273,499	+				-0.2
2,273,695	+		LRK53_RS10170	0.53	-0.6
2,273,695	+		LRK53_RS10170	0.53	-0.8
2,273,695	+		LRK53_RS10170	0.53	+0.4
2,273,695	+		LRK53_RS10170	0.53	-1.3
2,273,695	+		LRK53_RS10170	0.53	+0.4
2,273,695	+		LRK53_RS10170	0.53	-1.3
2,273,695	+		LRK53_RS10170	0.53	+1.8
2,273,695	+		LRK53_RS10170	0.53	-0.4
2,273,695	+		LRK53_RS10170	0.53	-1.1
2,273,695	+		LRK53_RS10170	0.53	-1.1
2,273,695	+		LRK53_RS10170	0.53	-1.3
2,273,695	+		LRK53_RS10170	0.53	-1.6
2,273,695	+		LRK53_RS10170	0.53	-0.3
2,273,695	+		LRK53_RS10170	0.53	-0.1
2,273,695	+		LRK53_RS10170	0.53	+0.1
2,273,695	+		LRK53_RS10170	0.53	-1.2
2,273,695	+		LRK53_RS10170	0.53	-1.2
2,273,695	+		LRK53_RS10170	0.53	-0.2
2,273,695	+		LRK53_RS10170	0.53	-1.9
2,273,695	+		LRK53_RS10170	0.53	-2.2
2,273,695	+		LRK53_RS10170	0.53	-0.2
2,273,695	+		LRK53_RS10170	0.53	-1.5
2,273,695	+		LRK53_RS10170	0.53	-0.9
2,273,695	+		LRK53_RS10170	0.53	-0.7
2,273,695	+		LRK53_RS10170	0.53	-1.1
2,273,696	-		LRK53_RS10170	0.54	+0.0
2,273,696	-		LRK53_RS10170	0.54	-1.4
2,273,696	-		LRK53_RS10170	0.54	-1.8
2,273,696	-		LRK53_RS10170	0.54	+1.9
2,273,696	-		LRK53_RS10170	0.54	-1.4
2,273,696	-		LRK53_RS10170	0.54	-1.0
2,273,696	-		LRK53_RS10170	0.54	-1.0
2,273,696	-		LRK53_RS10170	0.54	-2.3
2,273,696	-		LRK53_RS10170	0.54	-0.6
2,273,696	-		LRK53_RS10170	0.54	+0.1
2,273,696	-		LRK53_RS10170	0.54	+0.1
2,273,696	-		LRK53_RS10170	0.54	-1.3
2,273,696	-		LRK53_RS10170	0.54	-1.2
2,273,696	-		LRK53_RS10170	0.54	+0.2
2,273,696	-		LRK53_RS10170	0.54	+0.1
2,273,696	-		LRK53_RS10170	0.54	-0.2
2,273,696	-		LRK53_RS10170	0.54	-2.1
2,273,696	-		LRK53_RS10170	0.54	-1.4
2,273,696	-		LRK53_RS10170	0.54	-0.4
2,273,696	-		LRK53_RS10170	0.54	-1.0
2,273,696	-		LRK53_RS10170	0.54	-2.7
2,273,696	-		LRK53_RS10170	0.54	-1.6
2,273,696	-		LRK53_RS10170	0.54	-0.6
2,273,696	-		LRK53_RS10170	0.54	-0.4
2,273,696	-		LRK53_RS10170	0.54	+0.1
2,273,696	-		LRK53_RS10170	0.54	-1.3
2,273,696	-		LRK53_RS10170	0.54	-1.4
2,273,696	-		LRK53_RS10170	0.54	+0.8
2,273,696	-		LRK53_RS10170	0.54	+0.8
2,273,696	-		LRK53_RS10170	0.54	-0.6
2,273,696	-		LRK53_RS10170	0.54	+1.1
2,273,696	-		LRK53_RS10170	0.54	+1.1
2,273,696	-		LRK53_RS10170	0.54	+0.1
2,273,696	-		LRK53_RS10170	0.54	-1.3
2,273,848	+				-0.2
2,273,848	+				-0.6
2,273,848	+				+1.0
2,273,849	-				+0.7
2,273,849	-				+0.1
2,273,849	-				-0.2
2,273,882	+		LRK53_RS10175	0.23	+0.3
2,273,882	+		LRK53_RS10175	0.23	-0.7
2,273,882	+		LRK53_RS10175	0.23	-0.6
2,273,920	+		LRK53_RS10175	0.41	+0.4
2,273,920	+		LRK53_RS10175	0.41	-2.3
2,273,920	+		LRK53_RS10175	0.41	-1.2
2,273,920	+		LRK53_RS10175	0.41	-1.3
2,273,920	+		LRK53_RS10175	0.41	-0.2
2,273,921	-		LRK53_RS10175	0.42	-2.5
2,273,921	-		LRK53_RS10175	0.42	-0.2
2,273,948	-		LRK53_RS10175	0.55	-0.7
2,273,948	-		LRK53_RS10175	0.55	+2.0
2,273,971	+		LRK53_RS10175	0.66	-1.2
2,273,971	+		LRK53_RS10175	0.66	+0.3
2,273,971	+		LRK53_RS10175	0.66	+1.3
2,273,971	+		LRK53_RS10175	0.66	+0.6
2,273,972	-		LRK53_RS10175	0.66	-2.0
2,273,972	-		LRK53_RS10175	0.66	+0.1
2,273,992	+		LRK53_RS10175	0.76	-0.5
2,273,992	+		LRK53_RS10175	0.76	-0.7
2,273,992	+		LRK53_RS10175	0.76	-1.1
2,273,992	+		LRK53_RS10175	0.76	-0.4
2,273,993	-		LRK53_RS10175	0.76	-0.4
2,273,993	-		LRK53_RS10175	0.76	+0.6
2,273,993	-		LRK53_RS10175	0.76	-0.4
2,273,993	-		LRK53_RS10175	0.76	+0.8
2,274,143	+				-0.7
2,274,143	+				-1.2
2,274,143	+				+1.8
2,274,144	-				-1.6
2,274,144	-				-1.0
2,274,144	-				-1.6
2,274,144	-				-0.2
2,274,144	-				-0.7
2,274,144	-				-0.8
2,274,144	-				+1.0
2,274,144	-				-0.2
2,274,144	-				-1.2
2,274,281	+		LRK53_RS10180	0.15	-2.3
2,274,282	-		LRK53_RS10180	0.15	-0.4
2,274,328	+		LRK53_RS10180	0.18	-0.5
2,274,329	-		LRK53_RS10180	0.18	-0.6
2,274,329	-		LRK53_RS10180	0.18	-0.9
2,274,329	-		LRK53_RS10180	0.18	-1.2
2,274,547	-		LRK53_RS10180	0.32	-2.3
2,274,677	+		LRK53_RS10180	0.40	-0.7
2,274,678	-		LRK53_RS10180	0.40	-1.0
2,274,678	-		LRK53_RS10180	0.40	-1.0
2,274,678	-		LRK53_RS10180	0.40	-2.7
2,274,722	-		LRK53_RS10180	0.43	-1.3
2,275,104	-		LRK53_RS10180	0.66	-2.3
2,275,104	-		LRK53_RS10180	0.66	-0.7
2,275,104	-		LRK53_RS10180	0.66	+1.6
2,275,352	+		LRK53_RS10180	0.82	-1.2
2,275,352	+		LRK53_RS10180	0.82	-1.5
2,275,352	+		LRK53_RS10180	0.82	-1.6
2,275,352	+		LRK53_RS10180	0.82	-0.7
2,275,415	+		LRK53_RS10180	0.86	-0.2
2,275,485	+				-0.1
2,275,485	+				+0.0
2,275,485	+				-2.7
2,275,486	-				-0.7
2,275,486	-				-0.7
2,275,486	-				-1.6
2,275,486	-				-1.8
2,275,486	-				+0.1
2,275,486	-				-0.3
2,275,486	-				-1.4
2,275,685	-				-2.3
2,276,107	+				+1.1
2,276,107	+				-2.1
2,276,108	-				-1.0
2,276,108	-				+1.3
2,276,246	+				+0.4
2,276,246	+				+1.8
2,276,246	+				-0.2
2,276,246	+				-1.7
2,276,290	+		LRK53_RS10190	0.12	-3.4