Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS07800

Experiment: biofilm; Day1; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Aluminum chloride 1mM
1,741,004	+				+1.4
1,741,005	-				-1.9
1,741,069	+				-0.6
1,741,069	+				-0.9
1,741,069	+				-2.0
1,741,069	+				-0.6
1,741,069	+				-0.6
1,741,069	+				-0.5
1,741,069	+				+1.0
1,741,070	-				-0.6
1,741,070	-				+1.7
1,741,114	+				+1.4
1,741,219	-				-0.4
1,741,261	+				-0.6
1,741,261	+				-1.6
1,741,261	+				-1.1
1,741,261	+				+0.4
1,741,261	+				-2.2
1,741,261	+				-1.2
1,741,261	+				-0.1
1,741,261	+				-1.0
1,741,261	+				-0.6
1,741,261	+				-1.9
1,741,262	-				+0.2
1,741,659	+		LRK53_RS07795	0.58	+1.0
1,741,659	+		LRK53_RS07795	0.58	-1.4
1,741,659	+		LRK53_RS07795	0.58	-0.7
1,741,659	+		LRK53_RS07795	0.58	+0.1
1,741,659	+		LRK53_RS07795	0.58	-0.2
1,741,660	-		LRK53_RS07795	0.58	-1.0
1,741,660	-		LRK53_RS07795	0.58	-0.0
1,741,660	-		LRK53_RS07795	0.58	-1.1
1,741,740	-		LRK53_RS07795	0.71	-0.4
1,741,740	-		LRK53_RS07795	0.71	-0.8
1,741,740	-		LRK53_RS07795	0.71	-0.6
1,741,800	+		LRK53_RS07795	0.81	+1.4
1,741,801	-		LRK53_RS07795	0.81	-0.4
1,741,801	-		LRK53_RS07795	0.81	-0.7
1,741,801	-		LRK53_RS07795	0.81	+1.1
1,742,004	+		LRK53_RS07800	0.18	-0.2
1,742,005	-		LRK53_RS07800	0.18	-0.2
1,742,108	+		LRK53_RS07800	0.40	-0.5
1,742,108	+		LRK53_RS07800	0.40	-0.3
1,742,108	+		LRK53_RS07800	0.40	-1.9
1,742,109	-		LRK53_RS07800	0.40	-0.0
1,742,109	-		LRK53_RS07800	0.40	-0.1
1,742,109	-		LRK53_RS07800	0.40	+0.8
1,742,109	-		LRK53_RS07800	0.40	-1.7
1,742,109	-		LRK53_RS07800	0.40	-0.3
1,742,109	-		LRK53_RS07800	0.40	+0.0
1,742,109	-		LRK53_RS07800	0.40	-2.5
1,742,109	-		LRK53_RS07800	0.40	+0.6
1,742,162	+		LRK53_RS07800	0.51	-1.2
1,742,162	+		LRK53_RS07800	0.51	-1.2
1,742,162	+		LRK53_RS07800	0.51	-1.4
1,742,162	+		LRK53_RS07800	0.51	+0.1
1,742,162	+		LRK53_RS07800	0.51	-1.6
1,742,162	+		LRK53_RS07800	0.51	+0.9
1,742,163	-		LRK53_RS07800	0.51	-0.4
1,742,163	-		LRK53_RS07800	0.51	+0.0
1,742,163	-		LRK53_RS07800	0.51	-0.3
1,742,163	-		LRK53_RS07800	0.51	+0.5
1,742,163	-		LRK53_RS07800	0.51	-1.3
1,742,163	-		LRK53_RS07800	0.51	-1.7
1,742,163	-		LRK53_RS07800	0.51	+0.8
1,742,163	-		LRK53_RS07800	0.51	-1.0
1,742,163	-		LRK53_RS07800	0.51	-0.5
1,742,163	-		LRK53_RS07800	0.51	-0.0
1,742,310	+		LRK53_RS07800	0.82	-0.5
1,742,311	-		LRK53_RS07800	0.82	-0.1
1,742,311	-		LRK53_RS07800	0.82	-0.0
1,742,394	+				+0.1
1,742,394	+				-1.7
1,742,394	+				-1.2
1,742,394	+				+1.0
1,742,394	+				+0.1
1,742,394	+				-1.7
1,742,394	+				+0.5
1,742,394	+				+0.9
1,742,394	+				-0.5
1,742,394	+				+0.2
1,742,394	+				-1.4
1,742,394	+				+0.1
1,742,394	+				-1.7
1,742,394	+				-2.0
1,742,394	+				-1.0
1,742,394	+				-1.1
1,742,394	+				+1.1
1,742,395	-				+0.4
1,742,395	-				-2.9
1,742,395	-				-0.8
1,742,395	-				-0.6
1,742,395	-				-0.4
1,742,395	-				-0.3
1,742,395	-				+0.1
1,742,395	-				-1.7
1,742,395	-				-0.1
1,742,395	-				-2.9
1,742,395	-				-0.7
1,742,395	-				-1.5
1,742,395	-				+0.3
1,742,395	-				+0.5
1,742,395	-				-1.9
1,742,554	+		LRK53_RS07805	0.15	-1.7
1,742,555	-		LRK53_RS07805	0.15	-1.6
1,742,555	-		LRK53_RS07805	0.15	+0.9
1,742,555	-		LRK53_RS07805	0.15	-1.6
1,742,678	+		LRK53_RS07805	0.27	-0.5
1,742,678	+		LRK53_RS07805	0.27	+0.5
1,742,678	+		LRK53_RS07805	0.27	-1.4
1,742,678	+		LRK53_RS07805	0.27	-1.5
1,742,678	+		LRK53_RS07805	0.27	+0.4
1,742,678	+		LRK53_RS07805	0.27	-0.8
1,742,678	+		LRK53_RS07805	0.27	+1.0
1,742,678	+		LRK53_RS07805	0.27	-2.0
1,742,678	+		LRK53_RS07805	0.27	-1.4
1,742,678	+		LRK53_RS07805	0.27	-0.0
1,742,678	+		LRK53_RS07805	0.27	+0.4
1,742,678	+		LRK53_RS07805	0.27	-2.0
1,742,678	+		LRK53_RS07805	0.27	+1.6
1,742,678	+		LRK53_RS07805	0.27	-0.1
1,742,678	+		LRK53_RS07805	0.27	-0.1
1,742,678	+		LRK53_RS07805	0.27	-2.0
1,742,678	+		LRK53_RS07805	0.27	-1.0
1,742,678	+		LRK53_RS07805	0.27	-2.0
1,742,678	+		LRK53_RS07805	0.27	+2.1
1,742,678	+		LRK53_RS07805	0.27	-1.5
1,742,679	-		LRK53_RS07805	0.27	-2.2
1,742,679	-		LRK53_RS07805	0.27	+0.5
1,742,679	-		LRK53_RS07805	0.27	-2.5
1,742,679	-		LRK53_RS07805	0.27	-0.2
1,742,679	-		LRK53_RS07805	0.27	-2.4
1,742,679	-		LRK53_RS07805	0.27	-1.6
1,742,679	-		LRK53_RS07805	0.27	-2.1
1,742,679	-		LRK53_RS07805	0.27	-0.7
1,742,679	-		LRK53_RS07805	0.27	+1.0
1,742,679	-		LRK53_RS07805	0.27	-0.8
1,742,679	-		LRK53_RS07805	0.27	-1.1
1,742,679	-		LRK53_RS07805	0.27	-1.1
1,742,679	-		LRK53_RS07805	0.27	+2.3
1,742,734	+		LRK53_RS07805	0.32	-1.4
1,742,734	+		LRK53_RS07805	0.32	+0.0
1,742,735	-		LRK53_RS07805	0.32	-0.2
1,742,977	+		LRK53_RS07805	0.55	-1.2
1,742,977	+		LRK53_RS07805	0.55	-0.7
1,742,977	+		LRK53_RS07805	0.55	-1.6
1,742,977	+		LRK53_RS07805	0.55	-2.0
1,742,978	-		LRK53_RS07805	0.55	-0.5
1,742,978	-		LRK53_RS07805	0.55	-0.9
1,742,978	-		LRK53_RS07805	0.55	-0.5
1,742,978	-		LRK53_RS07805	0.55	-0.1
1,742,978	-		LRK53_RS07805	0.55	-1.9
1,742,978	-		LRK53_RS07805	0.55	+1.4
1,743,142	+		LRK53_RS07805	0.71	+0.2
1,743,142	+		LRK53_RS07805	0.71	+0.8
1,743,142	+		LRK53_RS07805	0.71	+0.6
1,743,142	+		LRK53_RS07805	0.71	-0.2
1,743,142	+		LRK53_RS07805	0.71	-0.7
1,743,142	+		LRK53_RS07805	0.71	+0.3
1,743,142	+		LRK53_RS07805	0.71	-0.4
1,743,142	+		LRK53_RS07805	0.71	-1.7
1,743,142	+		LRK53_RS07805	0.71	-2.3
1,743,143	-		LRK53_RS07805	0.71	-0.9
1,743,143	-		LRK53_RS07805	0.71	-1.2
1,743,143	-		LRK53_RS07805	0.71	-1.4
1,743,143	-		LRK53_RS07805	0.71	-0.6
1,743,143	-		LRK53_RS07805	0.71	-0.0
1,743,151	+		LRK53_RS07805	0.72	+0.5
1,743,265	+		LRK53_RS07805	0.83	-0.7
1,743,265	+		LRK53_RS07805	0.83	+1.6
1,743,265	+		LRK53_RS07805	0.83	-0.5
1,743,265	+		LRK53_RS07805	0.83	+0.5
1,743,265	+		LRK53_RS07805	0.83	-1.1
1,743,265	+		LRK53_RS07805	0.83	-0.8
1,743,266	-		LRK53_RS07805	0.83	-0.4
1,743,266	-		LRK53_RS07805	0.83	+0.2
1,743,266	-		LRK53_RS07805	0.83	-0.9
1,743,266	-		LRK53_RS07805	0.83	+0.4
1,743,266	-		LRK53_RS07805	0.83	+1.4
1,743,266	-		LRK53_RS07805	0.83	-1.2
1,743,266	-		LRK53_RS07805	0.83	-1.2