Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS04765

Experiment: biofilm; Day1; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Aluminum chloride 1mM
1,110,101	+				-0.6
1,110,101	+				+0.7
1,110,101	+				-1.6
1,110,102	-				-0.5
1,110,102	-				-1.9
1,110,113	+		LRK53_RS04755	0.13	-1.2
1,110,113	+		LRK53_RS04755	0.13	+1.6
1,110,113	+		LRK53_RS04755	0.13	-0.1
1,110,113	+		LRK53_RS04755	0.13	-0.8
1,110,114	-		LRK53_RS04755	0.13	-0.6
1,110,114	-		LRK53_RS04755	0.13	+0.2
1,110,114	-		LRK53_RS04755	0.13	+2.0
1,110,114	-		LRK53_RS04755	0.13	-1.0
1,110,180	+		LRK53_RS04755	0.41	-2.2
1,110,180	+		LRK53_RS04755	0.41	-0.5
1,110,180	+		LRK53_RS04755	0.41	+0.4
1,110,180	+		LRK53_RS04755	0.41	-1.4
1,110,180	+		LRK53_RS04755	0.41	-0.7
1,110,180	+		LRK53_RS04755	0.41	-2.4
1,110,180	+		LRK53_RS04755	0.41	-1.8
1,110,180	+		LRK53_RS04755	0.41	-2.5
1,110,180	+		LRK53_RS04755	0.41	-0.2
1,110,180	+		LRK53_RS04755	0.41	+0.1
1,110,180	+		LRK53_RS04755	0.41	-0.9
1,110,180	+		LRK53_RS04755	0.41	-1.7
1,110,181	-		LRK53_RS04755	0.41	-1.4
1,110,181	-		LRK53_RS04755	0.41	-0.3
1,110,181	-		LRK53_RS04755	0.41	-1.2
1,110,181	-		LRK53_RS04755	0.41	+1.6
1,110,181	-		LRK53_RS04755	0.41	-0.6
1,110,181	-		LRK53_RS04755	0.41	-0.4
1,110,216	-		LRK53_RS04755	0.56	+0.8
1,110,281	-		LRK53_RS04755	0.84	-1.0
1,110,317	+				+0.0
1,110,317	+				-2.0
1,110,317	+				-0.6
1,110,317	+				-1.1
1,110,317	+				-2.2
1,110,317	+				-1.4
1,110,317	+				+1.8
1,110,317	+				-1.0
1,110,317	+				-0.5
1,110,414	+				-0.4
1,110,414	+				-1.0
1,110,414	+				+0.9
1,110,414	+				+0.2
1,110,414	+				+0.0
1,110,414	+				+0.7
1,110,415	-				+2.1
1,110,415	-				-0.8
1,110,415	-				-1.0
1,110,415	-				-0.3
1,110,652	-		LRK53_RS04760	0.44	-0.2
1,110,652	-		LRK53_RS04760	0.44	+0.5
1,110,710	+		LRK53_RS04760	0.54	-1.9
1,110,710	+		LRK53_RS04760	0.54	-1.4
1,110,710	+		LRK53_RS04760	0.54	-1.0
1,110,710	+		LRK53_RS04760	0.54	-0.7
1,110,710	+		LRK53_RS04760	0.54	-0.1
1,110,710	+		LRK53_RS04760	0.54	-0.6
1,110,710	+		LRK53_RS04760	0.54	-1.3
1,110,711	-		LRK53_RS04760	0.54	+0.4
1,110,711	-		LRK53_RS04760	0.54	-1.4
1,110,711	-		LRK53_RS04760	0.54	-0.5
1,110,711	-		LRK53_RS04760	0.54	-2.0
1,110,711	-		LRK53_RS04760	0.54	-1.4
1,110,747	+		LRK53_RS04760	0.60	-0.3
1,110,747	+		LRK53_RS04760	0.60	-1.2
1,110,748	-		LRK53_RS04760	0.61	+0.2
1,110,750	+		LRK53_RS04760	0.61	+0.5
1,110,750	+		LRK53_RS04760	0.61	-0.1
1,110,750	+		LRK53_RS04760	0.61	-0.6
1,110,750	+		LRK53_RS04760	0.61	+0.2
1,110,750	+		LRK53_RS04760	0.61	-1.3
1,110,750	+		LRK53_RS04760	0.61	+0.2
1,110,750	+		LRK53_RS04760	0.61	+0.7
1,110,750	+		LRK53_RS04760	0.61	+0.3
1,110,750	+		LRK53_RS04760	0.61	-0.6
1,110,750	+		LRK53_RS04760	0.61	-0.6
1,110,750	+		LRK53_RS04760	0.61	-0.3
1,110,750	+		LRK53_RS04760	0.61	+0.7
1,110,751	-		LRK53_RS04760	0.61	+0.9
1,110,751	-		LRK53_RS04760	0.61	+0.6
1,110,751	-		LRK53_RS04760	0.61	-1.5
1,110,751	-		LRK53_RS04760	0.61	+0.2
1,110,751	-		LRK53_RS04760	0.61	-2.3
1,110,751	-		LRK53_RS04760	0.61	+0.2
1,110,751	-		LRK53_RS04760	0.61	-0.8
1,110,837	+		LRK53_RS04760	0.76	-1.3
1,110,837	+		LRK53_RS04760	0.76	-0.3
1,110,837	+		LRK53_RS04760	0.76	-1.0
1,110,837	+		LRK53_RS04760	0.76	-0.4
1,110,838	-		LRK53_RS04760	0.76	+0.5
1,110,838	-		LRK53_RS04760	0.76	-2.2
1,110,838	-		LRK53_RS04760	0.76	-0.4
1,110,838	-		LRK53_RS04760	0.76	-0.4
1,110,838	-		LRK53_RS04760	0.76	-0.7
1,110,838	-		LRK53_RS04760	0.76	-1.5
1,110,838	-		LRK53_RS04760	0.76	+0.7
1,110,838	-		LRK53_RS04760	0.76	+0.5
1,110,838	-		LRK53_RS04760	0.76	+0.0
1,110,838	-		LRK53_RS04760	0.76	-1.2
1,110,838	-		LRK53_RS04760	0.76	-0.1
1,110,838	-		LRK53_RS04760	0.76	-0.4
1,111,014	+				-0.5
1,111,014	+				-0.1
1,111,014	+				-0.4
1,111,015	-				+1.8
1,111,015	-				-0.2
1,111,040	+				-1.1
1,111,040	+				-0.4
1,111,040	+				-0.5
1,111,040	+				-0.9
1,111,041	-				-0.9
1,111,041	-				-0.4
1,111,041	-				-0.6
1,111,041	-				-0.5
1,111,041	-				-0.9
1,111,041	-				-1.2
1,111,053	+				+1.8
1,111,053	+				-1.7
1,111,053	+				+0.0
1,111,053	+				+0.1
1,111,054	-				-0.7
1,111,054	-				+1.4
1,111,054	-				-1.8
1,111,216	+		LRK53_RS04765	0.11	-1.8
1,111,216	+		LRK53_RS04765	0.11	-1.3
1,111,217	-		LRK53_RS04765	0.11	-2.4
1,111,252	+		LRK53_RS04765	0.13	-0.9
1,111,253	-		LRK53_RS04765	0.13	-1.5
1,111,429	+		LRK53_RS04765	0.26	+0.0
1,111,429	+		LRK53_RS04765	0.26	-0.5
1,111,430	-		LRK53_RS04765	0.26	-0.5
1,111,537	+		LRK53_RS04765	0.34	-1.3
1,111,538	-		LRK53_RS04765	0.34	-0.8
1,111,538	-		LRK53_RS04765	0.34	-0.4
1,111,538	-		LRK53_RS04765	0.34	+0.1
1,111,618	+		LRK53_RS04765	0.40	-2.4
1,112,133	+		LRK53_RS04765	0.78	-1.4
1,112,133	+		LRK53_RS04765	0.78	-1.4
1,112,134	-		LRK53_RS04765	0.78	-0.7
1,112,334	+				-3.0
1,112,413	-				+1.6
1,112,446	+				+0.2
1,112,446	+				-0.8
1,112,446	+				-2.2
1,112,446	+				-1.4
1,112,446	+				-1.8
1,112,446	+				-1.5
1,112,446	+				-1.2
1,112,446	+				-0.5
1,112,447	-				-1.9
1,112,512	+		LRK53_RS04770	0.12	-1.3
1,112,512	+		LRK53_RS04770	0.12	-2.0
1,112,512	+		LRK53_RS04770	0.12	-2.5
1,112,513	-		LRK53_RS04770	0.12	-1.2
1,112,513	-		LRK53_RS04770	0.12	-2.3
1,112,513	-		LRK53_RS04770	0.12	+0.1
1,112,513	-		LRK53_RS04770	0.12	-0.5
1,112,513	-		LRK53_RS04770	0.12	-0.8
1,112,513	-		LRK53_RS04770	0.12	-0.6
1,112,622	+		LRK53_RS04770	0.32	+0.6
1,112,623	-		LRK53_RS04770	0.32	-1.1
1,112,623	-		LRK53_RS04770	0.32	-0.5
1,112,830	+		LRK53_RS04770	0.70	-0.9
1,112,830	+		LRK53_RS04770	0.70	-0.5
1,112,830	+		LRK53_RS04770	0.70	-0.8
1,112,830	+		LRK53_RS04770	0.70	+1.4
1,112,830	+		LRK53_RS04770	0.70	-0.5
1,112,830	+		LRK53_RS04770	0.70	-0.9
1,112,830	+		LRK53_RS04770	0.70	-0.7
1,112,830	+		LRK53_RS04770	0.70	+0.3
1,112,830	+		LRK53_RS04770	0.70	+0.5
1,112,831	-		LRK53_RS04770	0.70	-1.0
1,112,831	-		LRK53_RS04770	0.70	+1.2
1,112,831	-		LRK53_RS04770	0.70	-0.8
1,112,831	-		LRK53_RS04770	0.70	-0.4
1,112,831	-		LRK53_RS04770	0.70	+0.3
1,112,831	-		LRK53_RS04770	0.70	-0.4
1,112,922	+		LRK53_RS04770	0.87	-1.5
1,112,922	+		LRK53_RS04770	0.87	-1.0
1,112,922	+		LRK53_RS04770	0.87	-1.2
1,112,922	+		LRK53_RS04770	0.87	-1.7
1,112,922	+		LRK53_RS04770	0.87	+0.9
1,112,923	-		LRK53_RS04770	0.87	-2.2
1,112,923	-		LRK53_RS04770	0.87	-0.1
1,112,923	-		LRK53_RS04770	0.87	-1.3
1,112,923	-		LRK53_RS04770	0.87	-1.8
1,112,929	+		LRK53_RS04770	0.88	-0.1
1,112,929	+		LRK53_RS04770	0.88	+0.0
1,112,930	-		LRK53_RS04770	0.88	+0.5
1,112,930	-		LRK53_RS04770	0.88	-0.8
1,113,058	+		LRK53_RS04775	0.12	-0.4
1,113,058	+		LRK53_RS04775	0.12	-0.3
1,113,058	+		LRK53_RS04775	0.12	+0.7
1,113,058	+		LRK53_RS04775	0.12	-1.9
1,113,058	+		LRK53_RS04775	0.12	-0.1
1,113,058	+		LRK53_RS04775	0.12	+1.2
1,113,058	+		LRK53_RS04775	0.12	-0.4
1,113,058	+		LRK53_RS04775	0.12	-2.1
1,113,058	+		LRK53_RS04775	0.12	-0.7
1,113,058	+		LRK53_RS04775	0.12	-1.7
1,113,059	-		LRK53_RS04775	0.12	-0.5
1,113,059	-		LRK53_RS04775	0.12	-1.3
1,113,059	-		LRK53_RS04775	0.12	+0.7
1,113,059	-		LRK53_RS04775	0.12	-0.3
1,113,059	-		LRK53_RS04775	0.12	-1.3
1,113,059	-		LRK53_RS04775	0.12	-0.3
1,113,059	-		LRK53_RS04775	0.12	-1.0
1,113,059	-		LRK53_RS04775	0.12	+1.7
1,113,138	+		LRK53_RS04775	0.25	-1.4
1,113,138	+		LRK53_RS04775	0.25	+1.1
1,113,138	+		LRK53_RS04775	0.25	-0.2
1,113,138	+		LRK53_RS04775	0.25	-2.1
1,113,138	+		LRK53_RS04775	0.25	-1.7
1,113,138	+		LRK53_RS04775	0.25	+0.3
1,113,138	+		LRK53_RS04775	0.25	+1.2
1,113,138	+		LRK53_RS04775	0.25	-0.8
1,113,138	+		LRK53_RS04775	0.25	-0.5
1,113,138	+		LRK53_RS04775	0.25	-0.5
1,113,138	+		LRK53_RS04775	0.25	-1.1
1,113,138	+		LRK53_RS04775	0.25	-0.2
1,113,138	+		LRK53_RS04775	0.25	-0.7
1,113,138	+		LRK53_RS04775	0.25	-0.8
1,113,139	-		LRK53_RS04775	0.26	+1.4
1,113,139	-		LRK53_RS04775	0.26	-0.2
1,113,139	-		LRK53_RS04775	0.26	-0.4
1,113,139	-		LRK53_RS04775	0.26	+1.7
1,113,139	-		LRK53_RS04775	0.26	-0.3
1,113,139	-		LRK53_RS04775	0.26	+0.2
1,113,139	-		LRK53_RS04775	0.26	-1.2
1,113,139	-		LRK53_RS04775	0.26	+0.5
1,113,139	-		LRK53_RS04775	0.26	+0.0
1,113,139	-		LRK53_RS04775	0.26	-0.2
1,113,139	-		LRK53_RS04775	0.26	-0.6
1,113,139	-		LRK53_RS04775	0.26	-2.1
1,113,139	-		LRK53_RS04775	0.26	+0.2
1,113,139	-		LRK53_RS04775	0.26	-1.8
1,113,139	-		LRK53_RS04775	0.26	-0.3
1,113,139	-		LRK53_RS04775	0.26	-0.6
1,113,139	-		LRK53_RS04775	0.26	-0.1
1,113,139	-		LRK53_RS04775	0.26	-0.8
1,113,139	-		LRK53_RS04775	0.26	-0.9
1,113,139	-		LRK53_RS04775	0.26	+2.1
1,113,285	+		LRK53_RS04775	0.51	-1.6
1,113,285	+		LRK53_RS04775	0.51	-2.3
1,113,285	+		LRK53_RS04775	0.51	+0.4
1,113,285	+		LRK53_RS04775	0.51	-0.5
1,113,285	+		LRK53_RS04775	0.51	-0.4
1,113,286	-		LRK53_RS04775	0.51	+0.0
1,113,286	-		LRK53_RS04775	0.51	-0.3