Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03772

Experiment: monoculture; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 5
4,216,271	+		MIT1002_03771	0.19	+1.0
4,216,271	+		MIT1002_03771	0.19	+0.4
4,216,271	+		MIT1002_03771	0.19	+0.7
4,216,271	+		MIT1002_03771	0.19	+2.0
4,216,271	+		MIT1002_03771	0.19	-2.8
4,216,271	+		MIT1002_03771	0.19	+1.6
4,216,279	-		MIT1002_03771	0.20	+0.3
4,216,281	+		MIT1002_03771	0.20	+1.0
4,216,281	+		MIT1002_03771	0.20	+1.4
4,216,322	+		MIT1002_03771	0.24	-0.5
4,216,396	-		MIT1002_03771	0.30	-0.6
4,216,440	-		MIT1002_03771	0.34	+2.6
4,216,516	-		MIT1002_03771	0.40	-1.2
4,216,519	+		MIT1002_03771	0.40	-1.6
4,216,519	+		MIT1002_03771	0.40	+0.1
4,216,552	-		MIT1002_03771	0.43	-0.3
4,216,670	+		MIT1002_03771	0.53	+2.0
4,216,701	+		MIT1002_03771	0.56	+0.9
4,216,748	+		MIT1002_03771	0.60	-0.3
4,216,761	-		MIT1002_03771	0.61	+0.0
4,216,984	+		MIT1002_03771	0.80	-0.7
4,217,023	+		MIT1002_03771	0.83	-0.5
4,217,026	-		MIT1002_03771	0.84	-1.2
4,217,031	-		MIT1002_03771	0.84	-0.2
4,217,065	+		MIT1002_03771	0.87	+0.7
4,217,079	+		MIT1002_03771	0.88	-0.7
4,217,108	+				+0.4
4,217,108	+				+2.0
4,217,131	-				+3.1
4,217,150	+				+0.7
4,217,191	-				-0.6
4,217,219	-				+0.8
4,217,237	-				+0.4
4,217,242	+				-0.6
4,217,250	-				-0.8
4,217,335	-				-1.4
4,217,345	+		MIT1002_03772	0.10	+0.1
4,217,361	+		MIT1002_03772	0.12	+0.4
4,217,487	+		MIT1002_03772	0.26	-0.4
4,217,487	+		MIT1002_03772	0.26	-0.1
4,217,489	+		MIT1002_03772	0.26	-1.4
4,217,499	+		MIT1002_03772	0.27	+1.0
4,217,507	-		MIT1002_03772	0.28	-0.7
4,217,801	+		MIT1002_03772	0.61	-1.0
4,217,801	+		MIT1002_03772	0.61	+1.4
4,217,828	+		MIT1002_03772	0.64	-0.5
4,217,841	+		MIT1002_03772	0.65	-1.1
4,217,843	+		MIT1002_03772	0.65	-0.7
4,217,849	-		MIT1002_03772	0.66	+1.0
4,218,043	-		MIT1002_03772	0.88	-0.2
4,218,055	+		MIT1002_03772	0.89	-0.5
4,218,071	-				-0.0
4,218,071	-				-0.2
4,218,119	+				+0.4
4,218,119	+				-0.5
4,218,120	-				+1.0
4,218,127	-				-0.3
4,218,127	-				+1.4
4,218,155	-				-1.8
4,218,201	-				-0.0
4,218,222	+				-1.2
4,218,278	+				-0.8
4,218,283	+				-0.7
4,218,284	+				+0.4
4,218,286	-				-0.2
4,218,286	-				-1.0
4,218,318	+				-1.1
4,218,325	+				-1.2
4,218,326	-				-0.6
4,218,412	+				-0.1
4,218,449	-				-1.1
4,218,469	+				-1.9
4,218,469	+				-1.1
4,218,469	+				+0.2
4,218,477	-				+0.3
4,218,479	+				+1.3
4,218,487	-				+0.3
4,218,487	-				+0.5
4,218,565	-		MIT1002_03773	0.18	-1.6
4,218,574	-		MIT1002_03773	0.20	+1.4
4,218,582	+		MIT1002_03773	0.21	-0.3
4,218,582	+		MIT1002_03773	0.21	+0.0
4,218,583	-		MIT1002_03773	0.21	-1.4
4,218,587	+		MIT1002_03773	0.22	-1.1
4,218,590	-		MIT1002_03773	0.22	+0.9
4,218,611	+		MIT1002_03773	0.25	-0.3
4,218,611	+		MIT1002_03773	0.25	-0.3
4,218,689	+		MIT1002_03773	0.37	-0.5
4,218,790	-		MIT1002_03773	0.52	-1.4
4,218,793	+		MIT1002_03773	0.53	+0.0
4,218,797	-		MIT1002_03773	0.53	-1.5
4,218,819	+		MIT1002_03773	0.57	-0.9
4,218,911	+		MIT1002_03773	0.71	-1.3
4,218,997	+		MIT1002_03773	0.84	-0.2
4,219,061	+				+0.6
4,219,089	+				+1.0
4,219,089	+				+0.3
4,219,089	+				+1.8
4,219,097	-				+0.2
4,219,097	-				-0.1
4,219,120	+				-0.8
4,219,122	+				+0.7
4,219,135	+				-1.0
4,219,143	-				-0.7
4,219,143	-				+3.0
4,219,143	-				-0.0
4,219,143	-				+0.0