Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03660

Experiment: monoculture; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 5
4,093,251	+		MIT1002_03659	0.32	-1.5
4,093,261	+		MIT1002_03659	0.33	+0.9
4,093,261	+		MIT1002_03659	0.33	-1.8
4,093,269	-		MIT1002_03659	0.33	+1.4
4,093,269	-		MIT1002_03659	0.33	-0.3
4,093,269	-		MIT1002_03659	0.33	+0.6
4,093,269	-		MIT1002_03659	0.33	+1.1
4,093,272	+		MIT1002_03659	0.34	-1.3
4,093,279	+		MIT1002_03659	0.34	+0.0
4,093,289	+		MIT1002_03659	0.35	+0.2
4,093,289	+		MIT1002_03659	0.35	+1.3
4,093,304	-		MIT1002_03659	0.36	-0.6
4,093,331	-		MIT1002_03659	0.38	+1.7
4,093,397	+		MIT1002_03659	0.43	+1.3
4,093,405	-		MIT1002_03659	0.44	+0.0
4,093,593	-		MIT1002_03659	0.58	-0.2
4,093,777	+		MIT1002_03659	0.72	-0.3
4,093,879	+		MIT1002_03659	0.79	-0.9
4,094,208	-				-0.3
4,094,352	+		MIT1002_03660	0.24	-0.0
4,094,360	+		MIT1002_03660	0.26	+2.0
4,094,385	-		MIT1002_03660	0.31	+0.0
4,094,385	-		MIT1002_03660	0.31	-0.1
4,094,404	+		MIT1002_03660	0.35	+0.1
4,094,412	-		MIT1002_03660	0.36	+0.5
4,094,459	-		MIT1002_03660	0.46	+0.1
4,094,479	+		MIT1002_03660	0.50	+0.0
4,094,561	+		MIT1002_03660	0.67	-0.8
4,094,582	+		MIT1002_03660	0.72	+0.3
4,094,600	-		MIT1002_03660	0.75	+0.6
4,094,666	-		MIT1002_03660	0.89	-1.3
4,094,703	+				-0.2
4,094,721	-				-0.4
4,094,744	-				-0.5
4,094,917	-				+2.5
4,094,990	-				+0.9
4,095,024	+				+1.6
4,095,037	-				+0.3
4,095,038	+				+0.3
4,095,079	+				-1.5
4,095,105	+				+2.3
4,095,112	+				+1.1
4,095,130	-		MIT1002_03661	0.13	-0.7
4,095,130	-		MIT1002_03661	0.13	+0.3
4,095,145	+		MIT1002_03661	0.16	+0.7
4,095,153	-		MIT1002_03661	0.17	+0.2
4,095,162	+		MIT1002_03661	0.19	-2.1
4,095,171	-		MIT1002_03661	0.21	+1.0
4,095,214	+		MIT1002_03661	0.29	-0.3
4,095,391	+		MIT1002_03661	0.64	+0.1
4,095,391	+		MIT1002_03661	0.64	-0.2
4,095,391	+		MIT1002_03661	0.64	+1.1
4,095,404	-		MIT1002_03661	0.66	+0.0
4,095,504	+		MIT1002_03661	0.85	-1.0
4,095,512	-		MIT1002_03661	0.87	+1.5
4,095,513	-		MIT1002_03661	0.87	+0.9