Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03209

Experiment: monoculture; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 5
3,576,180	+		MIT1002_03207	0.57	-1.4
3,576,180	+		MIT1002_03207	0.57	-0.1
3,576,183	-		MIT1002_03207	0.57	-0.7
3,576,210	+		MIT1002_03207	0.60	+0.4
3,576,341	+		MIT1002_03207	0.71	+0.4
3,576,364	+		MIT1002_03207	0.73	-1.9
3,576,374	-		MIT1002_03207	0.74	-0.6
3,576,391	+		MIT1002_03207	0.75	+0.3
3,576,480	-		MIT1002_03207	0.83	-0.9
3,576,500	-		MIT1002_03207	0.85	-0.6
3,576,525	+		MIT1002_03207	0.87	-0.5
3,576,525	+		MIT1002_03207	0.87	-1.4
3,576,525	+		MIT1002_03207	0.87	-0.1
3,576,525	+		MIT1002_03207	0.87	+1.6
3,576,525	+		MIT1002_03207	0.87	+0.5
3,576,539	+		MIT1002_03207	0.88	+0.8
3,576,559	+		MIT1002_03207	0.90	+1.0
3,576,560	+		MIT1002_03207	0.90	-0.7
3,576,565	-				-1.4
3,576,628	+				+0.9
3,577,074	-		MIT1002_03208	0.82	+1.2
3,577,210	-				+1.1
3,577,210	-				-2.2
3,577,210	-				-2.2
3,577,329	+				+1.7
3,577,360	+				-1.0
3,577,363	-				-0.2
3,577,368	-				-0.2
3,577,368	-				+0.9
3,577,368	-				-1.3
3,577,417	-		MIT1002_03209	0.12	-0.8
3,577,435	+		MIT1002_03209	0.13	-0.2
3,577,498	-		MIT1002_03209	0.16	-1.1
3,577,562	+		MIT1002_03209	0.20	-0.6
3,577,603	-		MIT1002_03209	0.22	-0.0
3,577,621	+		MIT1002_03209	0.23	-0.2
3,577,629	-		MIT1002_03209	0.23	-0.4
3,577,710	+		MIT1002_03209	0.27	+2.5
3,577,716	-		MIT1002_03209	0.28	+0.8
3,577,793	-		MIT1002_03209	0.31	-0.6
3,577,795	+		MIT1002_03209	0.32	+1.7
3,577,795	+		MIT1002_03209	0.32	-0.3
3,577,795	+		MIT1002_03209	0.32	-1.4
3,577,803	-		MIT1002_03209	0.32	+0.5
3,577,803	-		MIT1002_03209	0.32	-0.2
3,577,803	-		MIT1002_03209	0.32	+1.0
3,577,828	+		MIT1002_03209	0.33	+0.6
3,577,830	+		MIT1002_03209	0.33	-0.4
3,577,836	-		MIT1002_03209	0.34	+0.4
3,577,839	+		MIT1002_03209	0.34	+1.8
3,577,844	+		MIT1002_03209	0.34	+0.2
3,577,847	-		MIT1002_03209	0.34	+1.1
3,577,847	-		MIT1002_03209	0.34	+0.2
3,577,847	-		MIT1002_03209	0.34	-0.4
3,577,964	+		MIT1002_03209	0.40	-0.2
3,577,972	-		MIT1002_03209	0.41	+0.9
3,578,029	+		MIT1002_03209	0.44	-0.2
3,578,101	-		MIT1002_03209	0.47	-2.3
3,578,110	+		MIT1002_03209	0.48	+0.3
3,578,195	-		MIT1002_03209	0.52	-0.9
3,578,209	+		MIT1002_03209	0.53	-0.4
3,578,209	+		MIT1002_03209	0.53	-0.1
3,578,219	+		MIT1002_03209	0.53	+0.1
3,578,311	+		MIT1002_03209	0.58	-2.4
3,578,319	-		MIT1002_03209	0.58	+0.9
3,578,330	+		MIT1002_03209	0.59	+2.4
3,578,373	+		MIT1002_03209	0.61	-1.2
3,578,411	-		MIT1002_03209	0.63	-0.1
3,578,411	-		MIT1002_03209	0.63	+0.2
3,578,418	+		MIT1002_03209	0.63	-0.2
3,578,586	+		MIT1002_03209	0.72	-0.1
3,578,707	+		MIT1002_03209	0.78	+0.2
3,578,735	-		MIT1002_03209	0.80	-0.0
3,578,742	+		MIT1002_03209	0.80	+0.8
3,578,758	+		MIT1002_03209	0.81	+0.8
3,578,819	+		MIT1002_03209	0.84	+0.5
3,578,900	+		MIT1002_03209	0.88	+1.0
3,578,900	+		MIT1002_03209	0.88	-0.1
3,578,908	-		MIT1002_03209	0.88	+0.2
3,578,908	-		MIT1002_03209	0.88	+0.1
3,578,908	-		MIT1002_03209	0.88	-2.0
3,578,946	+				-0.1
3,578,946	+				+1.8
3,579,266	+				+1.5
3,579,301	+				-0.7
3,579,405	+				+0.6
3,579,443	-				-0.4
3,579,448	-				-1.8
3,579,450	+				-0.1
3,579,488	+		MIT1002_03210	0.11	+1.4
3,579,515	-		MIT1002_03210	0.12	-0.4
3,579,520	+		MIT1002_03210	0.12	-0.4
3,579,527	+		MIT1002_03210	0.12	-0.3
3,579,535	-		MIT1002_03210	0.13	+0.6
3,579,547	+		MIT1002_03210	0.13	-1.8
3,579,585	-		MIT1002_03210	0.14	+1.8
3,579,595	+		MIT1002_03210	0.15	-0.2
3,579,644	+		MIT1002_03210	0.16	+0.5
3,579,671	-		MIT1002_03210	0.17	+0.2
3,579,802	+		MIT1002_03210	0.22	-1.0
3,579,818	+		MIT1002_03210	0.22	-1.5
3,579,832	-		MIT1002_03210	0.23	+0.6
3,579,836	-		MIT1002_03210	0.23	-1.7
3,579,857	-		MIT1002_03210	0.24	-0.5
3,579,894	-		MIT1002_03210	0.25	-0.0
3,579,898	+		MIT1002_03210	0.25	-0.0
3,579,945	+		MIT1002_03210	0.27	-0.4
3,579,988	+		MIT1002_03210	0.28	-0.8
3,579,996	-		MIT1002_03210	0.29	-1.0
3,580,034	-		MIT1002_03210	0.30	-0.1
3,580,083	+		MIT1002_03210	0.32	+1.3