Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03042

Experiment: monoculture; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 5
3,392,500	+				+0.0
3,392,500	+				-0.1
3,392,500	+				-0.7
3,392,508	-				+1.5
3,392,511	+				-0.7
3,392,561	-				+0.5
3,392,561	-				-0.5
3,392,657	+				-0.4
3,392,709	+		MIT1002_03041	0.10	+2.5
3,392,709	+		MIT1002_03041	0.10	-0.8
3,392,709	+		MIT1002_03041	0.10	+1.3
3,392,709	+		MIT1002_03041	0.10	-0.4
3,392,709	+		MIT1002_03041	0.10	-0.8
3,392,803	+		MIT1002_03041	0.30	+0.9
3,392,803	+		MIT1002_03041	0.30	-0.4
3,392,811	-		MIT1002_03041	0.32	+0.4
3,392,882	+		MIT1002_03041	0.47	-0.0
3,392,882	+		MIT1002_03041	0.47	-0.3
3,392,890	-		MIT1002_03041	0.49	+0.2
3,392,890	-		MIT1002_03041	0.49	+0.7
3,392,890	-		MIT1002_03041	0.49	+1.3
3,392,902	+		MIT1002_03041	0.51	-1.3
3,392,918	+		MIT1002_03041	0.54	+2.3
3,392,924	-		MIT1002_03041	0.56	-0.0
3,392,925	+		MIT1002_03041	0.56	-0.7
3,393,100	+				-3.2
3,393,132	+				+1.8
3,393,140	-				-0.4
3,393,142	+				-0.2
3,393,142	+				-0.7
3,393,150	-				+1.2
3,393,150	-				+0.2
3,393,171	+				+1.1
3,393,172	+				-1.0
3,393,173	+				-0.3
3,393,173	+				+0.6
3,393,181	-				+0.6
3,393,188	+				-0.2
3,393,196	-				-0.9
3,393,196	-				+0.3
3,393,215	+				+0.0
3,393,247	-				+1.8
3,393,310	-				-0.3
3,393,320	-				-1.8
3,393,320	-				+0.6
3,393,330	+				-0.6
3,393,386	+				+1.2
3,393,394	-				+1.2
3,393,400	+				-0.0
3,393,426	-				-1.0
3,393,426	-				-1.3
3,393,426	-				+1.1
3,393,433	-				-2.0
3,393,493	-		MIT1002_03042	0.13	+0.4
3,393,521	-		MIT1002_03042	0.15	+2.4
3,393,521	-		MIT1002_03042	0.15	-1.3
3,393,578	+		MIT1002_03042	0.20	-2.3
3,393,595	+		MIT1002_03042	0.22	-0.9
3,393,600	+		MIT1002_03042	0.22	-0.5
3,393,653	-		MIT1002_03042	0.27	+0.2
3,393,661	+		MIT1002_03042	0.28	-1.0
3,393,696	+		MIT1002_03042	0.31	-0.8
3,393,696	+		MIT1002_03042	0.31	-0.9
3,393,703	-		MIT1002_03042	0.32	-1.2
3,393,736	+		MIT1002_03042	0.35	-1.7
3,393,737	+		MIT1002_03042	0.35	+2.4
3,393,737	+		MIT1002_03042	0.35	-0.1
3,393,744	-		MIT1002_03042	0.36	-0.3
3,393,745	-		MIT1002_03042	0.36	+0.3
3,393,820	+		MIT1002_03042	0.43	-1.8
3,393,828	-		MIT1002_03042	0.43	-0.5
3,393,828	-		MIT1002_03042	0.43	+0.2
3,393,828	-		MIT1002_03042	0.43	-0.9
3,393,894	-		MIT1002_03042	0.49	-0.2
3,393,922	+		MIT1002_03042	0.52	-0.4
3,393,949	+		MIT1002_03042	0.55	+1.4
3,393,955	+		MIT1002_03042	0.55	-0.2
3,393,957	-		MIT1002_03042	0.55	-1.2
3,394,045	+		MIT1002_03042	0.63	-0.1
3,394,087	-		MIT1002_03042	0.67	+0.1
3,394,265	+		MIT1002_03042	0.84	+0.1
3,394,275	+		MIT1002_03042	0.85	-1.9
3,394,383	+				-0.0
3,394,450	-				+0.4
3,394,502	-				+1.1
3,394,544	+				+0.8
3,394,545	-				+0.5
3,394,561	-				+0.2
3,394,676	-		MIT1002_03043	0.20	+0.6
3,394,771	+		MIT1002_03043	0.33	-1.4
3,394,771	+		MIT1002_03043	0.33	+0.8
3,394,771	+		MIT1002_03043	0.33	+0.3
3,394,779	-		MIT1002_03043	0.34	-0.7
3,394,779	-		MIT1002_03043	0.34	-0.5
3,394,779	-		MIT1002_03043	0.34	-1.4
3,394,802	+		MIT1002_03043	0.37	+0.3
3,394,887	-		MIT1002_03043	0.48	-0.2
3,394,921	+		MIT1002_03043	0.53	-0.0
3,394,921	+		MIT1002_03043	0.53	-0.2
3,395,043	-		MIT1002_03043	0.69	-0.8
3,395,088	-		MIT1002_03043	0.75	-1.9
3,395,193	+		MIT1002_03043	0.89	+0.5
3,395,193	+		MIT1002_03043	0.89	+0.7
3,395,201	-				+0.1
3,395,332	+				+0.5
3,395,386	-				+0.4
3,395,402	+				-0.4
3,395,414	+				+0.5
3,395,422	-				+0.2