Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02787

Experiment: monoculture; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 5
3,089,674	+		MIT1002_02785	0.81	-0.6
3,089,674	+		MIT1002_02785	0.81	+0.7
3,089,674	+		MIT1002_02785	0.81	-1.2
3,089,676	-		MIT1002_02785	0.81	+0.2
3,089,682	-		MIT1002_02785	0.82	-2.0
3,089,802	+				+0.8
3,089,838	-				-0.7
3,089,840	+				+0.2
3,089,848	-				-0.9
3,089,848	-				-2.3
3,089,932	+				-1.5
3,089,940	-				-0.8
3,089,950	-				-0.5
3,089,951	-				-0.3
3,089,951	-				-0.3
3,090,050	-		MIT1002_02786	0.15	-0.2
3,090,246	+		MIT1002_02786	0.46	-0.8
3,090,254	-		MIT1002_02786	0.48	+0.8
3,090,254	-		MIT1002_02786	0.48	-2.4
3,090,254	-		MIT1002_02786	0.48	-0.1
3,090,254	-		MIT1002_02786	0.48	-2.7
3,090,323	+		MIT1002_02786	0.59	-3.2
3,090,328	+		MIT1002_02786	0.60	-1.2
3,090,383	-		MIT1002_02786	0.68	-0.1
3,090,383	-		MIT1002_02786	0.68	+1.5
3,090,385	-		MIT1002_02786	0.69	-0.9
3,090,468	-		MIT1002_02786	0.82	-0.5
3,090,468	-		MIT1002_02786	0.82	-0.4
3,090,513	+		MIT1002_02786	0.89	+1.3
3,090,521	-				-0.7
3,090,580	-				+2.2
3,090,580	-				+0.0