Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02682

Experiment: monoculture; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 5
2,983,405	+				-0.4
2,983,411	+				+0.1
2,983,413	-				+0.1
2,983,413	-				+0.5
2,983,478	-				-1.6
2,983,582	+				+1.2
2,983,606	+				+1.0
2,983,640	+		MIT1002_02681	0.11	+0.2
2,983,730	+		MIT1002_02681	0.23	-0.6
2,983,743	-		MIT1002_02681	0.25	-0.1
2,983,805	-		MIT1002_02681	0.33	-0.7
2,983,856	-		MIT1002_02681	0.40	+0.4
2,983,861	+		MIT1002_02681	0.41	+0.4
2,983,861	+		MIT1002_02681	0.41	+0.9
2,983,880	+		MIT1002_02681	0.43	-0.3
2,983,880	+		MIT1002_02681	0.43	+2.5
2,983,914	-		MIT1002_02681	0.48	+0.4
2,983,929	-		MIT1002_02681	0.50	+1.5
2,983,945	-		MIT1002_02681	0.52	+1.5
2,984,003	-		MIT1002_02681	0.60	-0.5
2,984,017	+		MIT1002_02681	0.62	-0.1
2,984,017	+		MIT1002_02681	0.62	+1.1
2,984,025	-		MIT1002_02681	0.63	+0.7
2,984,025	-		MIT1002_02681	0.63	-0.2
2,984,064	-		MIT1002_02681	0.68	+0.3
2,984,204	+		MIT1002_02681	0.87	-0.1
2,984,226	-				+1.3
2,984,239	+				-0.5
2,984,262	+				+0.4
2,984,316	+				-0.2
2,984,323	+				-0.1
2,984,369	+		MIT1002_02682	0.12	-0.3
2,984,369	+		MIT1002_02682	0.12	-0.3
2,984,428	-		MIT1002_02682	0.22	-2.2
2,984,731	+		MIT1002_02682	0.72	-1.6
2,984,742	+		MIT1002_02682	0.73	+0.4
2,984,742	+		MIT1002_02682	0.73	-1.9
2,984,744	+		MIT1002_02682	0.74	-0.9
2,984,784	+		MIT1002_02682	0.80	-1.5
2,984,789	+		MIT1002_02682	0.81	-0.5
2,984,801	+		MIT1002_02682	0.83	-2.0
2,984,817	-		MIT1002_02682	0.86	-1.3
2,984,853	+				-1.9
2,984,853	+				-2.4
2,984,853	+				-3.0
2,984,861	-				-0.1
2,985,003	+				-1.4
2,985,003	+				-1.6
2,985,011	-				+0.1
2,985,011	-				-0.4
2,985,011	-				+1.0
2,985,015	+				-0.3
2,985,254	+		MIT1002_02683	0.40	-1.0
2,985,261	+		MIT1002_02683	0.41	+0.1
2,985,261	+		MIT1002_02683	0.41	+0.5
2,985,261	+		MIT1002_02683	0.41	-0.9
2,985,264	-		MIT1002_02683	0.42	+0.1
2,985,269	-		MIT1002_02683	0.43	-0.5
2,985,320	+		MIT1002_02683	0.52	-2.4
2,985,320	-		MIT1002_02683	0.52	+2.3
2,985,323	-		MIT1002_02683	0.52	-0.7
2,985,354	-		MIT1002_02683	0.57	+1.0
2,985,359	-		MIT1002_02683	0.58	+1.8
2,985,392	-		MIT1002_02683	0.64	-0.8
2,985,463	+		MIT1002_02683	0.76	+0.2
2,985,564	+				+0.4
2,985,594	+				+0.6
2,985,602	-				+1.1
2,985,635	+				+0.6
2,985,635	+				+0.7
2,985,635	+				+1.0
2,985,852	+				+1.9