Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02659

Experiment: monoculture; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 5
2,954,769	+				-0.3
2,954,882	-		MIT1002_02658	0.21	-0.6
2,954,883	+		MIT1002_02658	0.21	+1.5
2,954,891	-		MIT1002_02658	0.22	-0.3
2,954,901	-		MIT1002_02658	0.23	-0.3
2,954,901	-		MIT1002_02658	0.23	+0.0
2,954,940	-		MIT1002_02658	0.28	+0.5
2,954,983	-		MIT1002_02658	0.33	+1.6
2,955,021	-		MIT1002_02658	0.37	+3.0
2,955,021	-		MIT1002_02658	0.37	-0.2
2,955,101	+		MIT1002_02658	0.46	-0.4
2,955,115	-		MIT1002_02658	0.48	+2.4
2,955,235	+		MIT1002_02658	0.62	-0.5
2,955,266	+		MIT1002_02658	0.66	+0.9
2,955,389	-		MIT1002_02658	0.80	+0.9
2,955,418	+		MIT1002_02658	0.84	-0.6
2,955,527	+				-1.0
2,955,535	-				-0.9
2,955,668	-				+1.5
2,955,729	+				-0.3
2,955,742	-				-0.8
2,955,816	+		MIT1002_02659	0.29	+0.2
2,955,880	-		MIT1002_02659	0.45	+1.0
2,956,046	+		MIT1002_02659	0.89	+0.1
2,956,049	+		MIT1002_02659	0.90	+0.7
2,956,107	-				+1.3
2,956,125	+				-1.4
2,956,132	+				-2.5
2,956,133	-				+0.2
2,956,156	-				-1.9
2,956,279	+				-0.6
2,956,287	-				-1.1
2,956,292	-				+0.9
2,956,397	+				+0.5
2,956,402	-				-0.6
2,956,402	-				+2.6
2,956,405	-				+0.6
2,956,453	+				+0.2
2,956,453	+				-0.4
2,956,461	-				+0.1
2,956,468	-				+0.3
2,956,482	+				+0.3
2,956,482	+				-2.4
2,956,482	+				+0.6
2,956,482	+				+1.5
2,956,485	-				+0.6
2,956,485	-				+0.7
2,956,490	-				-1.1
2,956,602	+				+0.6
2,956,641	-				-0.4
2,956,641	-				+0.7
2,956,641	-				-1.7
2,956,641	-				+0.2
2,956,648	+				+1.0
2,956,651	-				+1.7
2,956,656	-				-1.6
2,956,756	+		MIT1002_02660	0.10	-2.0
2,956,756	+		MIT1002_02660	0.10	+1.9
2,956,881	-		MIT1002_02660	0.35	+1.4
2,956,963	-		MIT1002_02660	0.50	-1.0
2,957,017	-		MIT1002_02660	0.61	-0.1
2,957,017	-		MIT1002_02660	0.61	-0.6