Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02431

Experiment: monoculture; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 5
2,713,747	+		MIT1002_02430	0.34	-2.2
2,713,752	+		MIT1002_02430	0.34	-1.0
2,713,785	+		MIT1002_02430	0.36	-1.4
2,713,785	+		MIT1002_02430	0.36	-1.7
2,713,785	+		MIT1002_02430	0.36	-3.2
2,713,785	+		MIT1002_02430	0.36	+0.2
2,713,785	+		MIT1002_02430	0.36	+0.6
2,713,793	-		MIT1002_02430	0.37	+0.3
2,713,808	+		MIT1002_02430	0.38	+2.6
2,713,809	-		MIT1002_02430	0.38	+3.5
2,713,824	+		MIT1002_02430	0.39	+0.6
2,713,832	-		MIT1002_02430	0.39	+1.8
2,713,832	-		MIT1002_02430	0.39	+0.4
2,713,955	-		MIT1002_02430	0.48	-0.2
2,713,983	-		MIT1002_02430	0.49	+0.1
2,713,993	+		MIT1002_02430	0.50	+0.4
2,714,036	+		MIT1002_02430	0.53	-1.7
2,714,075	+		MIT1002_02430	0.56	+4.3
2,714,082	+		MIT1002_02430	0.56	-0.7
2,714,082	-		MIT1002_02430	0.56	+0.6
2,714,082	-		MIT1002_02430	0.56	-1.0
2,714,083	-		MIT1002_02430	0.56	+0.7
2,714,160	+		MIT1002_02430	0.61	-1.0
2,714,168	-		MIT1002_02430	0.62	-1.1
2,714,321	+		MIT1002_02430	0.72	+0.4
2,714,334	+		MIT1002_02430	0.73	+0.3
2,714,334	+		MIT1002_02430	0.73	+0.6
2,714,342	+		MIT1002_02430	0.74	+0.5
2,714,355	+		MIT1002_02430	0.74	-0.8
2,714,367	+		MIT1002_02430	0.75	-0.4
2,714,367	+		MIT1002_02430	0.75	-0.6
2,714,375	-		MIT1002_02430	0.76	+0.2
2,714,375	-		MIT1002_02430	0.76	+1.0
2,714,375	-		MIT1002_02430	0.76	-0.6
2,714,375	-		MIT1002_02430	0.76	-0.1
2,714,375	-		MIT1002_02430	0.76	-0.2
2,714,408	-		MIT1002_02430	0.78	+2.2
2,714,541	+		MIT1002_02430	0.87	+3.0
2,714,579	+		MIT1002_02430	0.89	-0.3
2,714,621	-				+0.1
2,714,631	-				-1.1
2,714,730	+				+0.8
2,714,730	+				+0.6
2,714,740	-				+2.5
2,714,888	-				+0.6
2,714,888	-				-0.1
2,714,928	+		MIT1002_02431	0.13	+0.2
2,714,936	-		MIT1002_02431	0.13	+0.1
2,714,951	+		MIT1002_02431	0.14	+1.3
2,714,951	+		MIT1002_02431	0.14	+0.7
2,714,974	-		MIT1002_02431	0.16	-0.2
2,714,982	+		MIT1002_02431	0.17	-0.5
2,714,990	-		MIT1002_02431	0.17	+0.2
2,715,086	+		MIT1002_02431	0.24	-0.4
2,715,102	-		MIT1002_02431	0.25	+1.4
2,715,123	+		MIT1002_02431	0.27	+0.8
2,715,170	-		MIT1002_02431	0.30	-0.2
2,715,184	+		MIT1002_02431	0.31	-1.4
2,715,184	+		MIT1002_02431	0.31	+0.6
2,715,192	-		MIT1002_02431	0.31	-2.2
2,715,206	-		MIT1002_02431	0.32	+1.2
2,715,215	+		MIT1002_02431	0.33	+0.6
2,715,239	-		MIT1002_02431	0.35	+0.7
2,715,241	+		MIT1002_02431	0.35	+3.6
2,715,267	+		MIT1002_02431	0.37	-1.3
2,715,296	+		MIT1002_02431	0.39	-0.2
2,715,296	+		MIT1002_02431	0.39	-0.9
2,715,328	+		MIT1002_02431	0.41	-0.2
2,715,328	+		MIT1002_02431	0.41	-1.4
2,715,328	-		MIT1002_02431	0.41	+1.1
2,715,335	-		MIT1002_02431	0.42	-0.6
2,715,336	-		MIT1002_02431	0.42	-0.6
2,715,363	+		MIT1002_02431	0.44	-0.4
2,715,404	+		MIT1002_02431	0.46	-1.0
2,715,412	-		MIT1002_02431	0.47	-0.1
2,715,420	-		MIT1002_02431	0.48	-0.3
2,715,477	+		MIT1002_02431	0.52	+2.3
2,715,526	+		MIT1002_02431	0.55	+0.7
2,715,529	-		MIT1002_02431	0.55	+0.3
2,715,533	+		MIT1002_02431	0.56	+1.2
2,715,579	+		MIT1002_02431	0.59	-0.0
2,715,587	-		MIT1002_02431	0.59	-0.4
2,715,641	+		MIT1002_02431	0.63	-2.3
2,715,644	-		MIT1002_02431	0.63	+0.1
2,715,661	+		MIT1002_02431	0.65	+1.3
2,715,693	-		MIT1002_02431	0.67	-1.8
2,715,697	+		MIT1002_02431	0.67	-0.0
2,715,725	+		MIT1002_02431	0.69	-0.4
2,715,820	-		MIT1002_02431	0.76	-1.1
2,715,866	+		MIT1002_02431	0.79	+0.6
2,715,876	-		MIT1002_02431	0.80	+1.5
2,715,876	-		MIT1002_02431	0.80	+0.3
2,715,876	-		MIT1002_02431	0.80	+0.6
2,715,923	-		MIT1002_02431	0.83	-1.2
2,715,925	-		MIT1002_02431	0.83	-0.4
2,715,967	+		MIT1002_02431	0.86	-0.5
2,716,019	-		MIT1002_02431	0.90	-0.2
2,716,023	+				+0.3
2,716,064	-				-0.8
2,716,064	-				+0.8
2,716,089	+				-1.3
2,716,169	-				-2.1
2,716,328	-		MIT1002_02432	0.11	+0.6
2,716,328	-		MIT1002_02432	0.11	+2.9
2,716,353	+		MIT1002_02432	0.12	-0.2
2,716,386	-		MIT1002_02432	0.14	-1.1
2,716,396	-		MIT1002_02432	0.15	-1.4
2,716,451	-		MIT1002_02432	0.19	-0.6
2,716,476	+		MIT1002_02432	0.20	+1.1
2,716,486	+		MIT1002_02432	0.21	-0.7
2,716,554	+		MIT1002_02432	0.25	+1.1
2,716,554	+		MIT1002_02432	0.25	+0.9
2,716,570	-		MIT1002_02432	0.26	-0.4
2,716,577	+		MIT1002_02432	0.27	-0.6
2,716,585	-		MIT1002_02432	0.27	+1.4
2,716,585	-		MIT1002_02432	0.27	-0.1
2,716,664	+		MIT1002_02432	0.32	+0.9
2,716,736	+		MIT1002_02432	0.37	-1.6
2,716,821	+		MIT1002_02432	0.43	+1.4
2,716,837	-		MIT1002_02432	0.44	-1.9
2,716,839	-		MIT1002_02432	0.44	+0.8
2,716,839	-		MIT1002_02432	0.44	+0.2
2,716,888	+		MIT1002_02432	0.47	+0.2
2,716,893	+		MIT1002_02432	0.47	+0.7
2,716,901	-		MIT1002_02432	0.48	-1.1
2,717,017	-		MIT1002_02432	0.55	-1.9
2,717,056	+		MIT1002_02432	0.58	-1.6
2,717,075	-		MIT1002_02432	0.59	+0.8
2,717,077	+		MIT1002_02432	0.59	+1.2
2,717,086	-		MIT1002_02432	0.60	+0.3
2,717,113	+		MIT1002_02432	0.61	-0.4
2,717,122	-		MIT1002_02432	0.62	+0.9
2,717,126	+		MIT1002_02432	0.62	-0.1