Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02070

Experiment: monoculture; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 5
2,330,060	+		MIT1002_02069	0.20	-0.2
2,330,100	+		MIT1002_02069	0.24	+1.0
2,330,120	-		MIT1002_02069	0.26	-0.6
2,330,159	+		MIT1002_02069	0.29	-0.7
2,330,170	+		MIT1002_02069	0.30	-2.3
2,330,194	+		MIT1002_02069	0.32	+0.3
2,330,199	+		MIT1002_02069	0.33	-1.4
2,330,267	+		MIT1002_02069	0.39	-0.6
2,330,275	-		MIT1002_02069	0.40	+0.5
2,330,346	+		MIT1002_02069	0.46	+1.8
2,330,549	-		MIT1002_02069	0.64	+0.1
2,330,551	+		MIT1002_02069	0.64	+0.3
2,330,558	+		MIT1002_02069	0.65	+0.5
2,330,563	+		MIT1002_02069	0.65	-0.3
2,330,571	-		MIT1002_02069	0.66	+0.9
2,330,571	-		MIT1002_02069	0.66	+1.2
2,330,579	+		MIT1002_02069	0.67	+1.8
2,330,579	+		MIT1002_02069	0.67	-0.7
2,330,579	+		MIT1002_02069	0.67	+1.6
2,330,579	+		MIT1002_02069	0.67	-0.2
2,330,587	-		MIT1002_02069	0.67	+0.0
2,330,587	-		MIT1002_02069	0.67	-0.2
2,330,587	-		MIT1002_02069	0.67	+0.3
2,330,587	-		MIT1002_02069	0.67	+0.6
2,330,587	-		MIT1002_02069	0.67	-0.7
2,330,595	-		MIT1002_02069	0.68	+0.2
2,330,654	-		MIT1002_02069	0.73	+0.2
2,330,697	+		MIT1002_02069	0.77	+1.3
2,330,700	-		MIT1002_02069	0.78	+1.1
2,330,902	+				+0.6
2,330,902	-				+1.6
2,330,910	-				-0.4
2,330,953	-				-1.0
2,330,958	+				+0.9
2,331,013	-				-1.4
2,331,026	+		MIT1002_02070	0.12	+2.1
2,331,026	+		MIT1002_02070	0.12	-0.2
2,331,093	+		MIT1002_02070	0.27	+0.6
2,331,093	+		MIT1002_02070	0.27	-2.3
2,331,129	+		MIT1002_02070	0.35	+0.4
2,331,137	+		MIT1002_02070	0.37	-0.7
2,331,219	-		MIT1002_02070	0.55	-0.8
2,331,219	-		MIT1002_02070	0.55	-0.5
2,331,225	+		MIT1002_02070	0.56	-0.1
2,331,233	-		MIT1002_02070	0.58	+1.2
2,331,271	+		MIT1002_02070	0.67	-1.0
2,331,348	-		MIT1002_02070	0.84	-1.6
2,331,404	-				-2.4