Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01820

Experiment: monoculture; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 5
2,028,754	+		MIT1002_01819	0.59	-2.1
2,028,798	+		MIT1002_01819	0.61	-0.5
2,028,842	-		MIT1002_01819	0.63	-0.3
2,028,974	+		MIT1002_01819	0.69	+0.8
2,029,035	-		MIT1002_01819	0.71	-0.9
2,029,035	-		MIT1002_01819	0.71	-0.8
2,029,113	-		MIT1002_01819	0.75	+0.2
2,029,147	+		MIT1002_01819	0.76	+0.0
2,029,205	+		MIT1002_01819	0.79	+0.5
2,029,231	+		MIT1002_01819	0.80	-0.4
2,029,251	+		MIT1002_01819	0.81	+0.3
2,029,342	+		MIT1002_01819	0.85	+0.9
2,029,496	-				-3.0
2,029,509	-				+0.9
2,029,552	+				-2.6
2,029,558	+				-0.0
2,029,707	+				-1.1
2,029,715	-				-0.3
2,029,732	+		MIT1002_01820	0.10	+0.0
2,029,762	-		MIT1002_01820	0.16	-1.9
2,029,780	-		MIT1002_01820	0.20	-0.2
2,029,839	+		MIT1002_01820	0.31	-0.1
2,029,844	+		MIT1002_01820	0.32	+1.4
2,029,847	-		MIT1002_01820	0.33	+1.6
2,029,987	+		MIT1002_01820	0.60	-0.0
2,030,060	+		MIT1002_01820	0.75	-0.7
2,030,188	+				-0.9
2,030,222	-				-0.6
2,030,248	+				+0.3
2,030,372	+				-1.1
2,030,707	-		MIT1002_01821	0.70	+0.6
2,030,749	+				+0.9
2,030,757	-				-0.5
2,030,757	-				-0.1
2,030,770	+				+0.1
2,030,929	+				-1.2
2,031,066	-				-0.7
2,031,153	+		MIT1002_01822	0.13	-1.5