Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01795

Experiment: monoculture; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 5
1,997,743	-		MIT1002_01794	0.16	-0.4
1,997,796	+		MIT1002_01794	0.27	+0.8
1,997,816	+		MIT1002_01794	0.32	+0.4
1,997,824	-		MIT1002_01794	0.33	-0.6
1,997,870	+		MIT1002_01794	0.43	-0.5
1,997,902	+		MIT1002_01794	0.50	+2.0
1,997,902	+		MIT1002_01794	0.50	-0.5
1,997,902	+		MIT1002_01794	0.50	-0.9
1,997,902	+		MIT1002_01794	0.50	-1.5
1,997,910	-		MIT1002_01794	0.52	+0.1
1,997,910	-		MIT1002_01794	0.52	+0.6
1,997,910	-		MIT1002_01794	0.52	-2.9
1,997,910	-		MIT1002_01794	0.52	-1.2
1,997,944	+		MIT1002_01794	0.59	-1.3
1,997,952	-		MIT1002_01794	0.61	+0.2
1,998,033	+		MIT1002_01794	0.78	-0.6
1,998,063	+		MIT1002_01794	0.85	+0.8
1,998,084	+		MIT1002_01794	0.89	+0.3
1,998,106	+				-0.9
1,998,117	-				-0.6
1,998,117	-				+1.0
1,998,206	+				+0.0
1,998,280	-				+0.2
1,998,338	+				-0.1
1,998,338	+				+0.4
1,998,338	+				+1.1
1,998,338	+				-3.3
1,998,338	+				-1.4
1,998,346	-				-0.3
1,998,347	+				+2.1
1,998,502	-				-0.9
1,998,516	+				+0.1
1,998,524	-				+0.0
1,998,546	+				-1.1
1,998,554	-				+0.6
1,998,559	-				-1.2
1,998,813	-		MIT1002_01795	0.16	-1.5
1,998,813	-		MIT1002_01795	0.16	-1.0
1,998,819	-		MIT1002_01795	0.17	-0.4
1,998,832	-		MIT1002_01795	0.19	+0.9
1,998,888	-		MIT1002_01795	0.26	-1.5
1,998,895	-		MIT1002_01795	0.27	-1.2
1,998,949	-		MIT1002_01795	0.34	-0.7
1,998,960	-		MIT1002_01795	0.36	+1.0
1,998,989	-		MIT1002_01795	0.40	-0.2
1,999,018	-		MIT1002_01795	0.44	+0.8
1,999,118	-		MIT1002_01795	0.57	-2.1
1,999,264	-		MIT1002_01795	0.77	-0.7
1,999,341	-		MIT1002_01795	0.87	-1.1
1,999,367	-				-0.2
1,999,484	+				+0.4
1,999,499	+				+0.3
1,999,599	+		MIT1002_01796	0.14	+0.3
1,999,664	-		MIT1002_01796	0.22	+1.2
1,999,809	-		MIT1002_01796	0.40	-2.7
1,999,850	-		MIT1002_01796	0.45	+0.6
1,999,855	-		MIT1002_01796	0.45	+0.1
1,999,859	-		MIT1002_01796	0.46	-1.1
1,999,923	-		MIT1002_01796	0.54	-1.8
1,999,961	-		MIT1002_01796	0.58	+1.6
1,999,969	+		MIT1002_01796	0.59	-0.5
1,999,969	+		MIT1002_01796	0.59	-0.1
2,000,021	+		MIT1002_01796	0.66	+0.1
2,000,021	+		MIT1002_01796	0.66	-0.6
2,000,029	-		MIT1002_01796	0.67	+1.4
2,000,029	-		MIT1002_01796	0.67	-0.8
2,000,040	-		MIT1002_01796	0.68	-0.4
2,000,214	-		MIT1002_01796	0.90	+2.1
2,000,217	+				-1.8
2,000,237	-				-1.2
2,000,238	-				-0.7
2,000,248	+				+0.2
2,000,253	+				-0.2
2,000,253	+				-0.2
2,000,256	-				-0.3
2,000,272	+				+0.8
2,000,302	+				-0.1
2,000,326	+				-0.4