Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01445

Experiment: monoculture; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 5
1,588,336	+				-0.8
1,588,432	+				+0.6
1,588,475	+				+0.3
1,588,484	-				-0.2
1,588,510	-				-0.6
1,588,537	+				-0.0
1,588,537	+				+0.2
1,588,545	-				-0.2
1,588,545	-				+1.0
1,588,545	-				-0.7
1,588,560	+				-1.6
1,588,645	+		MIT1002_01444	0.26	+1.3
1,588,645	+		MIT1002_01444	0.26	+1.5
1,588,651	-		MIT1002_01444	0.27	-0.2
1,588,676	-		MIT1002_01444	0.32	+1.0
1,588,676	-		MIT1002_01444	0.32	+0.0
1,588,687	+		MIT1002_01444	0.34	-0.1
1,588,695	-		MIT1002_01444	0.36	+0.4
1,588,695	-		MIT1002_01444	0.36	-1.2
1,588,695	-		MIT1002_01444	0.36	-0.0
1,588,711	+		MIT1002_01444	0.39	-0.3
1,588,721	+		MIT1002_01444	0.41	-1.5
1,588,776	-		MIT1002_01444	0.52	-1.0
1,588,852	-		MIT1002_01444	0.67	+0.8
1,588,952	-		MIT1002_01444	0.86	+0.4
1,588,960	+		MIT1002_01444	0.88	-0.8
1,589,270	-				-0.6
1,589,296	+				+0.2
1,590,229	-				+0.5
1,590,236	-				-0.1
1,590,246	-				+0.6
1,590,246	-				+1.8
1,590,253	-				-0.1
1,590,293	+				+0.5
1,590,303	+				-1.4
1,590,311	-				-0.4
1,590,311	-				-2.3
1,590,311	-				+0.1
1,590,342	+				-0.7
1,590,410	+				-4.0
1,590,557	-		MIT1002_01446	0.13	-0.3
1,590,579	-		MIT1002_01446	0.14	+0.3
1,590,591	+		MIT1002_01446	0.15	-1.3
1,590,599	-		MIT1002_01446	0.15	+0.4
1,590,685	+		MIT1002_01446	0.19	-1.7
1,590,685	+		MIT1002_01446	0.19	+0.2
1,590,692	+		MIT1002_01446	0.19	+1.0
1,590,693	-		MIT1002_01446	0.19	-2.5
1,590,693	-		MIT1002_01446	0.19	+2.2
1,590,710	-		MIT1002_01446	0.20	-1.6
1,590,751	-		MIT1002_01446	0.21	-0.5
1,590,752	-		MIT1002_01446	0.21	+1.2
1,590,833	+		MIT1002_01446	0.25	-0.1
1,590,841	-		MIT1002_01446	0.25	-0.2
1,590,846	-		MIT1002_01446	0.25	-0.9
1,590,867	+		MIT1002_01446	0.26	-0.3
1,590,867	+		MIT1002_01446	0.26	+1.1
1,590,875	-		MIT1002_01446	0.27	+2.0
1,590,903	+		MIT1002_01446	0.28	-0.9
1,590,909	+		MIT1002_01446	0.28	-1.4
1,590,911	-		MIT1002_01446	0.28	+0.9
1,590,911	-		MIT1002_01446	0.28	-1.8
1,590,950	+		MIT1002_01446	0.30	+0.7
1,590,996	+		MIT1002_01446	0.32	-0.6
1,590,997	+		MIT1002_01446	0.32	-1.6
1,591,014	+		MIT1002_01446	0.33	-1.1
1,591,014	+		MIT1002_01446	0.33	-1.2
1,591,022	-		MIT1002_01446	0.33	-1.2
1,591,039	-		MIT1002_01446	0.34	-0.4
1,591,069	+		MIT1002_01446	0.35	-0.3
1,591,153	-		MIT1002_01446	0.38	+0.5