Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01283

Experiment: monoculture; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 5
1,416,397	+		MIT1002_01282	0.11	-1.5
1,416,400	+		MIT1002_01282	0.12	-0.6
1,416,412	+		MIT1002_01282	0.13	-0.1
1,416,454	+		MIT1002_01282	0.17	-0.0
1,416,666	+		MIT1002_01282	0.36	-0.6
1,416,666	+		MIT1002_01282	0.36	-0.7
1,416,674	+		MIT1002_01282	0.37	-0.3
1,416,674	-		MIT1002_01282	0.37	+0.5
1,416,682	-		MIT1002_01282	0.38	-1.2
1,416,689	-		MIT1002_01282	0.39	+1.2
1,416,717	+		MIT1002_01282	0.41	-1.5
1,416,748	-		MIT1002_01282	0.44	-0.5
1,416,750	-		MIT1002_01282	0.44	+0.1
1,416,807	+		MIT1002_01282	0.49	-3.1
1,416,815	-		MIT1002_01282	0.50	-0.0
1,416,901	+		MIT1002_01282	0.58	+0.8
1,416,901	+		MIT1002_01282	0.58	-2.6
1,416,909	-		MIT1002_01282	0.59	+1.2
1,416,945	+		MIT1002_01282	0.62	-1.6
1,416,945	+		MIT1002_01282	0.62	-1.4
1,416,953	-		MIT1002_01282	0.63	+0.2
1,417,116	+		MIT1002_01282	0.78	-2.6
1,417,116	+		MIT1002_01282	0.78	-0.2
1,417,116	+		MIT1002_01282	0.78	-0.7
1,417,124	+		MIT1002_01282	0.79	-1.1
1,417,124	-		MIT1002_01282	0.79	+0.9
1,417,124	-		MIT1002_01282	0.79	+0.1
1,417,124	-		MIT1002_01282	0.79	-1.3
1,417,193	-		MIT1002_01282	0.85	-1.0
1,417,212	+		MIT1002_01282	0.87	-0.5
1,417,270	-				-0.9
1,417,275	-				+0.3
1,417,304	+				-1.4
1,417,304	+				+1.4
1,417,381	+				-0.2
1,417,415	+		MIT1002_01283	0.11	-1.0
1,417,498	+		MIT1002_01283	0.24	-1.8
1,417,528	-		MIT1002_01283	0.28	+0.2
1,417,600	+		MIT1002_01283	0.39	-1.6
1,417,607	+		MIT1002_01283	0.41	+0.5
1,417,619	-		MIT1002_01283	0.42	+0.0
1,417,717	+		MIT1002_01283	0.57	-0.5
1,417,726	-		MIT1002_01283	0.59	+0.4
1,417,745	-		MIT1002_01283	0.62	+2.3
1,417,750	-		MIT1002_01283	0.63	-0.0
1,417,815	+		MIT1002_01283	0.73	-0.7
1,417,821	+		MIT1002_01283	0.73	+1.0
1,417,839	+		MIT1002_01283	0.76	-2.2
1,417,849	+		MIT1002_01283	0.78	-2.3
1,417,849	+		MIT1002_01283	0.78	+0.2
1,417,857	-		MIT1002_01283	0.79	-0.7
1,417,980	+				-0.4
1,418,035	-				+1.2
1,418,035	-				+0.0
1,418,046	+				+1.9
1,418,106	-		MIT1002_01284	0.12	+0.5
1,418,113	+		MIT1002_01284	0.12	-1.5
1,418,113	+		MIT1002_01284	0.12	-0.7
1,418,113	+		MIT1002_01284	0.12	+3.1
1,418,113	+		MIT1002_01284	0.12	+0.2
1,418,113	+		MIT1002_01284	0.12	-0.5
1,418,113	+		MIT1002_01284	0.12	+1.0
1,418,113	+		MIT1002_01284	0.12	-0.9
1,418,113	+		MIT1002_01284	0.12	-0.3
1,418,113	+		MIT1002_01284	0.12	-0.4
1,418,113	+		MIT1002_01284	0.12	+0.7
1,418,121	-		MIT1002_01284	0.13	-1.2
1,418,121	-		MIT1002_01284	0.13	-0.8
1,418,121	-		MIT1002_01284	0.13	-2.4
1,418,121	-		MIT1002_01284	0.13	+0.4
1,418,121	-		MIT1002_01284	0.13	+1.1
1,418,121	-		MIT1002_01284	0.13	-2.3
1,418,207	-		MIT1002_01284	0.22	-0.0
1,418,282	+		MIT1002_01284	0.30	-0.7
1,418,286	-		MIT1002_01284	0.30	+0.8
1,418,286	-		MIT1002_01284	0.30	-1.1
1,418,318	+		MIT1002_01284	0.33	+1.2
1,418,342	+		MIT1002_01284	0.36	+1.2
1,418,463	+		MIT1002_01284	0.48	+0.7
1,418,550	+		MIT1002_01284	0.57	-0.0
1,418,784	+		MIT1002_01284	0.81	-0.9
1,418,804	+		MIT1002_01284	0.83	+0.5
1,418,864	+		MIT1002_01284	0.89	-0.7
1,418,864	+		MIT1002_01284	0.89	-0.4
1,418,882	-				+0.2
1,418,906	+				+0.4
1,418,922	+				-0.6
1,418,968	+				-1.1
1,418,969	+				-0.0
1,418,969	+				-1.7
1,418,969	+				-1.2
1,418,977	-				+0.8
1,418,977	-				+0.4
1,418,977	-				-0.8
1,418,977	-				-0.5
1,418,977	-				-0.5