Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01203

Experiment: monoculture; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 5
1,323,985	-		MIT1002_01202	0.24	-0.4
1,324,030	-		MIT1002_01202	0.28	+3.3
1,324,043	-		MIT1002_01202	0.29	-0.8
1,324,062	+		MIT1002_01202	0.31	+0.6
1,324,067	+		MIT1002_01202	0.31	-2.0
1,324,067	+		MIT1002_01202	0.31	+1.3
1,324,067	+		MIT1002_01202	0.31	+1.0
1,324,070	-		MIT1002_01202	0.31	-1.5
1,324,075	-		MIT1002_01202	0.32	+0.1
1,324,075	-		MIT1002_01202	0.32	+1.7
1,324,164	-		MIT1002_01202	0.39	-0.5
1,324,237	+		MIT1002_01202	0.45	+0.3
1,324,283	+		MIT1002_01202	0.49	-0.8
1,324,291	-		MIT1002_01202	0.50	+1.2
1,324,293	+		MIT1002_01202	0.50	-2.2
1,324,318	-		MIT1002_01202	0.52	-0.6
1,324,318	-		MIT1002_01202	0.52	+0.6
1,324,348	-		MIT1002_01202	0.54	-0.3
1,324,365	+		MIT1002_01202	0.56	+0.4
1,324,377	+		MIT1002_01202	0.57	-3.2
1,324,384	+		MIT1002_01202	0.57	+1.9
1,324,385	-		MIT1002_01202	0.57	-1.0
1,324,392	-		MIT1002_01202	0.58	+0.6
1,324,440	-		MIT1002_01202	0.62	-1.3
1,324,644	-		MIT1002_01202	0.79	-0.1
1,324,667	-		MIT1002_01202	0.81	+0.6
1,324,690	-		MIT1002_01202	0.82	-0.7
1,324,848	-				-0.1
1,324,855	+				-1.7
1,324,857	+				+0.7
1,324,940	+				+0.1
1,324,948	-				-2.6
1,324,983	-				-1.0
1,325,018	+				+0.6
1,325,026	-				+0.7
1,325,026	-				+0.5
1,325,144	+				+1.5
1,325,180	+				+2.6
1,325,198	-				-0.6
1,325,198	-				+0.3
1,325,205	-				-1.4
1,325,212	+				-1.1
1,325,220	-				+2.1
1,325,315	+		MIT1002_01203	0.12	-0.0
1,325,315	+		MIT1002_01203	0.12	+0.3
1,325,315	+		MIT1002_01203	0.12	-1.2
1,325,315	+		MIT1002_01203	0.12	-1.8
1,325,333	-		MIT1002_01203	0.12	-1.0
1,325,371	-		MIT1002_01203	0.14	-0.2
1,325,401	+		MIT1002_01203	0.15	+0.3
1,325,401	+		MIT1002_01203	0.15	-0.7
1,325,401	-		MIT1002_01203	0.15	-0.1
1,325,401	-		MIT1002_01203	0.15	-0.3
1,325,512	+		MIT1002_01203	0.19	-0.1
1,325,695	-		MIT1002_01203	0.25	+0.1
1,325,706	-		MIT1002_01203	0.25	-0.4
1,325,771	+		MIT1002_01203	0.27	-0.0
1,325,800	+		MIT1002_01203	0.28	+0.5
1,325,809	-		MIT1002_01203	0.29	+1.2
1,325,833	+		MIT1002_01203	0.30	+0.4
1,325,959	-		MIT1002_01203	0.34	-1.1
1,325,993	+		MIT1002_01203	0.35	-0.2
1,326,082	-		MIT1002_01203	0.38	+1.3
1,326,185	-		MIT1002_01203	0.42	-0.9
1,326,190	-		MIT1002_01203	0.42	-0.4
1,326,199	+		MIT1002_01203	0.42	+0.0
1,326,207	-		MIT1002_01203	0.43	-0.5
1,326,278	+		MIT1002_01203	0.45	+1.5
1,326,278	+		MIT1002_01203	0.45	+0.7
1,326,278	+		MIT1002_01203	0.45	-0.5
1,326,284	-		MIT1002_01203	0.45	-0.7
1,326,286	-		MIT1002_01203	0.45	+1.3
1,326,359	+		MIT1002_01203	0.48	-0.9
1,326,403	+		MIT1002_01203	0.49	-0.8
1,326,410	+		MIT1002_01203	0.50	+0.8
1,326,413	+		MIT1002_01203	0.50	-0.6
1,326,424	+		MIT1002_01203	0.50	-1.3
1,326,479	+		MIT1002_01203	0.52	+0.5
1,326,532	+		MIT1002_01203	0.54	-0.0
1,326,619	-		MIT1002_01203	0.57	-1.7
1,326,629	+		MIT1002_01203	0.57	-0.1
1,326,637	-		MIT1002_01203	0.57	+1.1
1,326,641	+		MIT1002_01203	0.58	+0.3
1,326,649	-		MIT1002_01203	0.58	+0.9
1,326,677	+		MIT1002_01203	0.59	+0.7
1,326,677	+		MIT1002_01203	0.59	-0.3
1,326,677	+		MIT1002_01203	0.59	-0.1
1,326,677	+		MIT1002_01203	0.59	+3.2
1,326,677	+		MIT1002_01203	0.59	+1.7
1,326,677	+		MIT1002_01203	0.59	-0.8
1,326,677	+		MIT1002_01203	0.59	-0.8
1,326,679	+		MIT1002_01203	0.59	+0.1
1,326,685	-		MIT1002_01203	0.59	+0.0
1,326,685	-		MIT1002_01203	0.59	-3.2
1,326,685	-		MIT1002_01203	0.59	+1.4
1,326,755	-		MIT1002_01203	0.62	-0.3
1,326,890	+		MIT1002_01203	0.66	-0.1
1,326,890	+		MIT1002_01203	0.66	-0.3
1,326,890	+		MIT1002_01203	0.66	-1.4
1,326,890	+		MIT1002_01203	0.66	+0.2
1,326,898	-		MIT1002_01203	0.67	-2.5
1,326,898	-		MIT1002_01203	0.67	-0.9
1,326,898	-		MIT1002_01203	0.67	+1.0
1,326,898	-		MIT1002_01203	0.67	+0.8
1,326,898	-		MIT1002_01203	0.67	-1.8
1,326,898	-		MIT1002_01203	0.67	+0.2
1,326,898	-		MIT1002_01203	0.67	+0.8
1,326,904	+		MIT1002_01203	0.67	-0.9
1,326,914	+		MIT1002_01203	0.67	-2.9
1,326,914	+		MIT1002_01203	0.67	+0.8
1,326,914	+		MIT1002_01203	0.67	+0.3
1,326,919	+		MIT1002_01203	0.67	-0.4
1,326,922	-		MIT1002_01203	0.67	-2.8
1,326,922	-		MIT1002_01203	0.67	-0.0
1,326,996	+		MIT1002_01203	0.70	+0.4
1,327,002	-		MIT1002_01203	0.70	-1.2
1,327,002	-		MIT1002_01203	0.70	-1.4
1,327,026	+		MIT1002_01203	0.71	-0.7
1,327,046	-		MIT1002_01203	0.72	+0.6
1,327,059	-		MIT1002_01203	0.72	-0.7
1,327,064	-		MIT1002_01203	0.72	+0.9
1,327,070	-		MIT1002_01203	0.72	+0.1
1,327,207	-		MIT1002_01203	0.77	+0.1
1,327,207	-		MIT1002_01203	0.77	-1.2
1,327,256	+		MIT1002_01203	0.79	+1.9
1,327,340	-		MIT1002_01203	0.82	+0.0
1,327,378	+		MIT1002_01203	0.83	-0.1
1,327,414	+		MIT1002_01203	0.84	-2.2
1,327,427	+		MIT1002_01203	0.85	-0.4
1,327,439	+		MIT1002_01203	0.85	-0.1
1,327,449	+		MIT1002_01203	0.86	+1.4
1,327,468	+		MIT1002_01203	0.86	+0.7
1,327,509	+		MIT1002_01203	0.88	-1.4
1,327,517	-		MIT1002_01203	0.88	+1.6
1,327,785	-				-3.8
1,327,797	-				+0.3
1,327,797	-				+0.4
1,327,797	-				+0.9
1,327,805	+				+0.6
1,327,810	+				-0.4
1,327,906	-				-0.0
1,327,973	-				-1.3
1,327,982	-				-0.6
1,327,984	+				+0.1
1,327,984	+				-0.9
1,327,984	+				-0.9
1,327,992	-				-1.3
1,327,994	+				-0.2
1,328,019	+		MIT1002_01204	0.11	-0.5
1,328,027	-		MIT1002_01204	0.12	-0.2
1,328,157	+		MIT1002_01204	0.26	-0.1
1,328,206	+		MIT1002_01204	0.32	-2.1
1,328,234	+		MIT1002_01204	0.35	+0.7
1,328,261	-		MIT1002_01204	0.38	+0.6
1,328,273	+		MIT1002_01204	0.40	-1.6
1,328,280	-		MIT1002_01204	0.40	-1.1
1,328,324	+		MIT1002_01204	0.45	-0.7
1,328,367	+		MIT1002_01204	0.50	-0.3
1,328,456	+		MIT1002_01204	0.60	-1.0
1,328,522	+		MIT1002_01204	0.68	+0.3
1,328,665	+		MIT1002_01204	0.84	+0.7
1,328,670	+		MIT1002_01204	0.85	+0.8
1,328,706	+		MIT1002_01204	0.89	-0.2
1,328,706	+		MIT1002_01204	0.89	-0.8
1,328,706	+		MIT1002_01204	0.89	-0.2
1,328,712	-		MIT1002_01204	0.90	-1.4
1,328,713	+		MIT1002_01204	0.90	-0.9
1,328,807	-				+0.6
1,328,845	-				+4.7
1,328,845	-				+0.6
1,328,855	-				+2.7
1,328,855	-				-0.8