Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00924

Experiment: monoculture; Experiment A, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 5
1,024,573	-		MIT1002_00923	0.34	-0.4
1,024,577	+		MIT1002_00923	0.34	+0.0
1,024,609	+		MIT1002_00923	0.37	+1.0
1,024,609	+		MIT1002_00923	0.37	+0.9
1,024,617	-		MIT1002_00923	0.38	+0.4
1,024,617	-		MIT1002_00923	0.38	-0.8
1,024,792	-		MIT1002_00923	0.52	-1.1
1,024,829	-		MIT1002_00923	0.55	+0.1
1,024,873	-		MIT1002_00923	0.59	-0.8
1,024,875	-		MIT1002_00923	0.59	+0.1
1,025,033	-		MIT1002_00923	0.73	+0.0
1,025,072	+		MIT1002_00923	0.76	+1.2
1,025,078	+		MIT1002_00923	0.76	+0.1
1,025,084	+		MIT1002_00923	0.77	+0.1
1,025,100	+		MIT1002_00923	0.78	+0.1
1,025,237	-		MIT1002_00923	0.90	+0.7
1,025,240	-				-0.5
1,025,285	+				-2.8
1,025,349	-				+0.1
1,025,352	-				-1.6
1,025,365	+				-0.6
1,025,385	+				+1.7
1,025,398	-				-1.6
1,025,406	+				+0.8
1,025,420	-				-0.7
1,025,725	+				-1.3
1,025,775	+				-0.5
1,025,776	-				+0.7
1,025,786	+				-0.0
1,025,794	-				-1.2
1,025,816	+				-1.5
1,025,824	-				+0.3
1,025,863	-				-0.2
1,025,881	+				+0.6
1,025,974	+				+0.7
1,025,983	-				+0.2
1,026,172	+		MIT1002_00925	0.17	-1.0
1,026,190	-		MIT1002_00925	0.18	-0.3
1,026,191	-		MIT1002_00925	0.18	-0.4
1,026,198	-		MIT1002_00925	0.18	-1.5
1,026,205	-		MIT1002_00925	0.18	-0.0
1,026,219	-		MIT1002_00925	0.19	+0.3
1,026,273	-		MIT1002_00925	0.21	+0.8
1,026,339	-		MIT1002_00925	0.23	+0.3
1,026,351	-		MIT1002_00925	0.23	-1.2
1,026,368	+		MIT1002_00925	0.24	-3.1
1,026,429	-		MIT1002_00925	0.26	-0.6
1,026,429	-		MIT1002_00925	0.26	-0.2
1,026,434	+		MIT1002_00925	0.26	-0.2
1,026,434	+		MIT1002_00925	0.26	-0.0
1,026,442	-		MIT1002_00925	0.27	-0.6
1,026,442	-		MIT1002_00925	0.27	+0.5
1,026,442	-		MIT1002_00925	0.27	-0.9
1,026,458	+		MIT1002_00925	0.27	+0.1
1,026,498	-		MIT1002_00925	0.29	+0.4
1,026,510	-		MIT1002_00925	0.29	+0.5