Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS25775

Experiment: Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
5,740,743	+				-0.5
5,740,743	+				+0.5
5,740,743	+				+0.3
5,740,743	+				-0.3
5,740,743	+				-0.8
5,740,743	+				-0.8
5,740,743	+				+1.3
5,740,743	+				-0.5
5,740,744	-				-2.7
5,740,744	-				+1.3
5,740,801	+				-0.1
5,740,801	+				-0.8
5,740,832	+				+0.6
5,740,833	-				+1.3
5,740,875	+				+0.0
5,740,876	-				+0.2
5,740,876	-				-2.1
5,740,993	+		QEN71_RS25770	0.23	-0.4
5,740,993	+		QEN71_RS25770	0.23	-0.3
5,740,993	+		QEN71_RS25770	0.23	-1.7
5,740,993	+		QEN71_RS25770	0.23	+0.0
5,740,993	+		QEN71_RS25770	0.23	-1.7
5,740,993	+		QEN71_RS25770	0.23	-0.1
5,740,993	+		QEN71_RS25770	0.23	-0.7
5,740,993	+		QEN71_RS25770	0.23	-0.9
5,740,993	+		QEN71_RS25770	0.23	-0.7
5,740,993	+		QEN71_RS25770	0.23	-0.5
5,740,993	+		QEN71_RS25770	0.23	-0.2
5,740,993	+		QEN71_RS25770	0.23	+1.2
5,740,993	+		QEN71_RS25770	0.23	+0.7
5,740,993	+		QEN71_RS25770	0.23	-0.8
5,740,993	+		QEN71_RS25770	0.23	-2.2
5,740,993	+		QEN71_RS25770	0.23	+1.3
5,740,993	+		QEN71_RS25770	0.23	-0.2
5,740,993	+		QEN71_RS25770	0.23	+0.0
5,740,993	+		QEN71_RS25770	0.23	+0.1
5,740,993	+		QEN71_RS25770	0.23	-0.3
5,740,994	-		QEN71_RS25770	0.23	-0.7
5,740,994	-		QEN71_RS25770	0.23	-0.8
5,740,994	-		QEN71_RS25770	0.23	-0.5
5,740,994	-		QEN71_RS25770	0.23	-1.7
5,740,994	-		QEN71_RS25770	0.23	+0.3
5,740,994	-		QEN71_RS25770	0.23	+0.5
5,740,994	-		QEN71_RS25770	0.23	-1.2
5,740,994	-		QEN71_RS25770	0.23	-0.0
5,740,994	-		QEN71_RS25770	0.23	-1.1
5,740,994	-		QEN71_RS25770	0.23	-0.4
5,740,994	-		QEN71_RS25770	0.23	+0.2
5,740,994	-		QEN71_RS25770	0.23	+0.1
5,740,994	-		QEN71_RS25770	0.23	-0.4
5,740,994	-		QEN71_RS25770	0.23	+0.9
5,741,046	+		QEN71_RS25770	0.30	-0.2
5,741,046	+		QEN71_RS25770	0.30	+1.0
5,741,065	+		QEN71_RS25770	0.32	-0.8
5,741,065	+		QEN71_RS25770	0.32	-1.0
5,741,065	+		QEN71_RS25770	0.32	+0.0
5,741,065	+		QEN71_RS25770	0.32	-0.7
5,741,065	+		QEN71_RS25770	0.32	-1.1
5,741,065	+		QEN71_RS25770	0.32	-0.2
5,741,065	+		QEN71_RS25770	0.32	-1.1
5,741,065	+		QEN71_RS25770	0.32	-0.8
5,741,065	+		QEN71_RS25770	0.32	+0.3
5,741,065	+		QEN71_RS25770	0.32	-1.3
5,741,065	+		QEN71_RS25770	0.32	-0.1
5,741,065	+		QEN71_RS25770	0.32	-0.1
5,741,065	+		QEN71_RS25770	0.32	-0.9
5,741,066	-		QEN71_RS25770	0.32	+0.2
5,741,066	-		QEN71_RS25770	0.32	-0.0
5,741,066	-		QEN71_RS25770	0.32	-0.3
5,741,066	-		QEN71_RS25770	0.32	-0.5
5,741,066	-		QEN71_RS25770	0.32	-0.8
5,741,066	-		QEN71_RS25770	0.32	-0.5
5,741,066	-		QEN71_RS25770	0.32	-1.3
5,741,066	-		QEN71_RS25770	0.32	-0.6
5,741,066	-		QEN71_RS25770	0.32	+1.0
5,741,066	-		QEN71_RS25770	0.32	+0.5
5,741,066	-		QEN71_RS25770	0.32	-0.6
5,741,104	+		QEN71_RS25770	0.37	+0.3
5,741,104	+		QEN71_RS25770	0.37	-1.8
5,741,104	+		QEN71_RS25770	0.37	-1.2
5,741,104	+		QEN71_RS25770	0.37	-0.9
5,741,104	+		QEN71_RS25770	0.37	-2.3
5,741,104	+		QEN71_RS25770	0.37	+1.3
5,741,104	+		QEN71_RS25770	0.37	-1.8
5,741,105	-		QEN71_RS25770	0.37	-2.4
5,741,105	-		QEN71_RS25770	0.37	-1.5
5,741,105	-		QEN71_RS25770	0.37	-0.6
5,741,105	-		QEN71_RS25770	0.37	+0.3
5,741,105	-		QEN71_RS25770	0.37	-0.9
5,741,105	-		QEN71_RS25770	0.37	+0.1
5,741,398	+		QEN71_RS25770	0.72	-0.7
5,741,398	+		QEN71_RS25770	0.72	+2.3
5,741,398	+		QEN71_RS25770	0.72	-0.6
5,741,398	+		QEN71_RS25770	0.72	-0.4
5,741,398	+		QEN71_RS25770	0.72	-0.7
5,741,398	+		QEN71_RS25770	0.72	-1.2
5,741,398	+		QEN71_RS25770	0.72	-1.2
5,741,398	+		QEN71_RS25770	0.72	-0.2
5,741,399	-		QEN71_RS25770	0.72	+1.0
5,741,399	-		QEN71_RS25770	0.72	-1.6
5,741,399	-		QEN71_RS25770	0.72	+0.1
5,741,399	-		QEN71_RS25770	0.72	+0.5
5,741,399	-		QEN71_RS25770	0.72	-0.5
5,741,399	-		QEN71_RS25770	0.72	-0.2
5,741,399	-		QEN71_RS25770	0.72	+0.1
5,741,399	-		QEN71_RS25770	0.72	-1.3
5,741,399	-		QEN71_RS25770	0.72	+0.3
5,741,584	+				+0.9
5,741,584	+				-2.1
5,741,584	+				-0.0
5,741,584	+				+0.0
5,741,584	+				-1.3
5,741,584	+				-1.3
5,741,585	-				-0.8
5,741,585	-				-1.5
5,741,585	-				-0.9
5,741,585	-				-1.9
5,741,648	+				+0.0
5,741,648	+				-2.7
5,741,649	-				-0.1
5,741,745	+				-0.4
5,741,881	+		QEN71_RS25775	0.16	+0.3
5,741,881	+		QEN71_RS25775	0.16	+0.1
5,741,882	-		QEN71_RS25775	0.16	-1.4
5,741,882	-		QEN71_RS25775	0.16	-1.6
5,741,882	-		QEN71_RS25775	0.16	-0.3
5,741,882	-		QEN71_RS25775	0.16	-2.2
5,742,064	+		QEN71_RS25775	0.30	-2.0
5,742,065	-		QEN71_RS25775	0.30	-0.6
5,742,147	+		QEN71_RS25775	0.36	+2.1
5,742,147	+		QEN71_RS25775	0.36	-2.2
5,742,310	+		QEN71_RS25775	0.49	+0.3
5,742,310	+		QEN71_RS25775	0.49	-1.7
5,742,310	+		QEN71_RS25775	0.49	+0.5
5,742,310	+		QEN71_RS25775	0.49	+0.3
5,742,310	+		QEN71_RS25775	0.49	+1.4
5,742,310	+		QEN71_RS25775	0.49	+0.0
5,742,310	+		QEN71_RS25775	0.49	-1.2
5,742,310	+		QEN71_RS25775	0.49	+0.7
5,742,311	-		QEN71_RS25775	0.49	-1.6
5,742,311	-		QEN71_RS25775	0.49	-0.1
5,742,311	-		QEN71_RS25775	0.49	+1.3
5,742,311	-		QEN71_RS25775	0.49	-0.3
5,742,311	-		QEN71_RS25775	0.49	+1.0
5,742,311	-		QEN71_RS25775	0.49	-0.6
5,742,311	-		QEN71_RS25775	0.49	-0.6
5,742,405	+		QEN71_RS25775	0.57	+2.5
5,742,405	+		QEN71_RS25775	0.57	-0.6
5,742,405	+		QEN71_RS25775	0.57	-1.0
5,742,405	+		QEN71_RS25775	0.57	-0.4
5,742,405	+		QEN71_RS25775	0.57	+0.5
5,742,405	+		QEN71_RS25775	0.57	-0.2
5,742,405	+		QEN71_RS25775	0.57	-1.6
5,742,405	+		QEN71_RS25775	0.57	-1.5
5,742,405	+		QEN71_RS25775	0.57	-0.3
5,742,405	+		QEN71_RS25775	0.57	+0.1
5,742,405	+		QEN71_RS25775	0.57	+0.6
5,742,405	+		QEN71_RS25775	0.57	-0.4
5,742,405	+		QEN71_RS25775	0.57	+0.2
5,742,405	+		QEN71_RS25775	0.57	-0.5
5,742,406	-		QEN71_RS25775	0.57	+2.3
5,742,406	-		QEN71_RS25775	0.57	+1.5
5,742,406	-		QEN71_RS25775	0.57	+0.3
5,742,406	-		QEN71_RS25775	0.57	+0.6
5,742,406	-		QEN71_RS25775	0.57	+0.5
5,742,406	-		QEN71_RS25775	0.57	+1.3
5,742,406	-		QEN71_RS25775	0.57	+2.3
5,742,433	+		QEN71_RS25775	0.59	-0.7
5,742,433	+		QEN71_RS25775	0.59	+2.0
5,742,433	+		QEN71_RS25775	0.59	+0.3
5,742,433	+		QEN71_RS25775	0.59	+1.6
5,742,433	+		QEN71_RS25775	0.59	-0.3
5,742,433	+		QEN71_RS25775	0.59	-2.1
5,742,434	-		QEN71_RS25775	0.59	-1.7
5,742,434	-		QEN71_RS25775	0.59	+4.0
5,742,434	-		QEN71_RS25775	0.59	-0.3
5,742,434	-		QEN71_RS25775	0.59	+0.3
5,742,435	+		QEN71_RS25775	0.59	+0.7
5,742,435	+		QEN71_RS25775	0.59	-0.1
5,742,435	+		QEN71_RS25775	0.59	-0.6
5,742,436	-		QEN71_RS25775	0.59	+2.0
5,742,436	-		QEN71_RS25775	0.59	+1.3
5,742,436	-		QEN71_RS25775	0.59	+1.0
5,742,436	-		QEN71_RS25775	0.59	-1.1
5,742,436	-		QEN71_RS25775	0.59	+1.1
5,742,436	-		QEN71_RS25775	0.59	+0.1
5,742,436	-		QEN71_RS25775	0.59	-0.3
5,742,436	-		QEN71_RS25775	0.59	-0.7
5,742,441	+		QEN71_RS25775	0.59	-1.5
5,742,441	+		QEN71_RS25775	0.59	+0.7
5,742,441	+		QEN71_RS25775	0.59	-1.5
5,742,441	+		QEN71_RS25775	0.59	-0.5
5,742,441	+		QEN71_RS25775	0.59	+0.6
5,742,441	+		QEN71_RS25775	0.59	+1.1
5,742,441	+		QEN71_RS25775	0.59	+1.1
5,742,441	+		QEN71_RS25775	0.59	-0.3
5,742,441	+		QEN71_RS25775	0.59	+0.1
5,742,441	+		QEN71_RS25775	0.59	+1.8
5,742,441	+		QEN71_RS25775	0.59	-0.3
5,742,441	+		QEN71_RS25775	0.59	-1.7
5,742,441	+		QEN71_RS25775	0.59	+1.0
5,742,441	+		QEN71_RS25775	0.59	-0.6
5,742,441	+		QEN71_RS25775	0.59	-0.8
5,742,441	+		QEN71_RS25775	0.59	-0.4
5,742,441	+		QEN71_RS25775	0.59	+0.4
5,742,441	+		QEN71_RS25775	0.59	+0.5
5,742,441	+		QEN71_RS25775	0.59	-0.4
5,742,441	+		QEN71_RS25775	0.59	+2.4
5,742,441	+		QEN71_RS25775	0.59	+1.9
5,742,441	+		QEN71_RS25775	0.59	+1.9
5,742,441	+		QEN71_RS25775	0.59	-0.3
5,742,441	+		QEN71_RS25775	0.59	-0.1
5,742,442	-		QEN71_RS25775	0.60	+0.5
5,742,442	-		QEN71_RS25775	0.60	+0.8
5,742,442	-		QEN71_RS25775	0.60	+1.4
5,742,442	-		QEN71_RS25775	0.60	-0.3
5,742,442	-		QEN71_RS25775	0.60	+1.9
5,742,442	-		QEN71_RS25775	0.60	-0.8
5,742,442	-		QEN71_RS25775	0.60	+0.2
5,742,442	-		QEN71_RS25775	0.60	-0.8
5,742,442	-		QEN71_RS25775	0.60	+0.1
5,742,442	-		QEN71_RS25775	0.60	-0.5
5,742,442	-		QEN71_RS25775	0.60	+0.6
5,742,442	-		QEN71_RS25775	0.60	-1.1
5,742,442	-		QEN71_RS25775	0.60	+0.0
5,742,442	-		QEN71_RS25775	0.60	+0.1
5,742,442	-		QEN71_RS25775	0.60	-1.5
5,742,442	-		QEN71_RS25775	0.60	-0.2
5,742,442	-		QEN71_RS25775	0.60	-0.4
5,742,442	-		QEN71_RS25775	0.60	+0.1
5,742,442	-		QEN71_RS25775	0.60	-1.0
5,742,453	+		QEN71_RS25775	0.60	+1.3
5,742,454	-		QEN71_RS25775	0.60	-0.9
5,742,481	+		QEN71_RS25775	0.63	-1.0
5,742,481	+		QEN71_RS25775	0.63	-0.6
5,742,481	+		QEN71_RS25775	0.63	-0.3
5,742,481	+		QEN71_RS25775	0.63	-2.0
5,742,482	-		QEN71_RS25775	0.63	+0.5
5,742,550	+		QEN71_RS25775	0.68	-0.5
5,742,594	+		QEN71_RS25775	0.71	-1.0
5,742,595	-		QEN71_RS25775	0.72	+1.1
5,742,595	-		QEN71_RS25775	0.72	-0.9
5,742,934	+				-3.4
5,742,934	+				+0.7
5,742,935	-				-0.0
5,742,947	-				+0.3
5,742,980	+				-1.4
5,742,980	+				-1.5
5,742,980	+				+0.8
5,742,980	+				+0.3
5,742,980	+				-0.7
5,742,980	+				+0.3
5,742,981	-				+0.3
5,742,981	-				+0.3
5,742,981	-				-1.5
5,742,984	+				+0.6
5,742,984	+				-1.3
5,742,984	+				+0.3
5,742,984	+				-0.1
5,742,984	+				-0.6
5,742,985	-				+0.3
5,742,985	-				-0.7
5,742,985	-				+1.0
5,742,985	-				+0.7
5,742,985	-				-2.3
5,743,021	+				-0.5
5,743,052	-				-1.3
5,743,218	+		QEN71_RS25780	0.20	+1.1
5,743,218	+		QEN71_RS25780	0.20	+2.5
5,743,218	+		QEN71_RS25780	0.20	+0.7
5,743,218	+		QEN71_RS25780	0.20	-0.4
5,743,218	+		QEN71_RS25780	0.20	+1.6
5,743,218	+		QEN71_RS25780	0.20	+1.6
5,743,218	+		QEN71_RS25780	0.20	-1.6
5,743,218	+		QEN71_RS25780	0.20	-2.7
5,743,218	+		QEN71_RS25780	0.20	+0.4
5,743,218	+		QEN71_RS25780	0.20	+0.9
5,743,219	-		QEN71_RS25780	0.20	-0.1
5,743,219	-		QEN71_RS25780	0.20	+1.0
5,743,219	-		QEN71_RS25780	0.20	-0.2
5,743,219	-		QEN71_RS25780	0.20	+0.4
5,743,219	-		QEN71_RS25780	0.20	-1.3
5,743,219	-		QEN71_RS25780	0.20	+0.5
5,743,491	+		QEN71_RS25780	0.46	+0.9
5,743,491	+		QEN71_RS25780	0.46	-0.4
5,743,491	+		QEN71_RS25780	0.46	-0.2
5,743,491	+		QEN71_RS25780	0.46	-0.1
5,743,492	-		QEN71_RS25780	0.46	-1.0
5,743,492	-		QEN71_RS25780	0.46	-1.8
5,743,492	-		QEN71_RS25780	0.46	+0.1
5,743,492	-		QEN71_RS25780	0.46	+0.8
5,743,492	-		QEN71_RS25780	0.46	+0.4
5,743,492	-		QEN71_RS25780	0.46	-1.0
5,743,506	+		QEN71_RS25780	0.47	-0.5
5,743,506	+		QEN71_RS25780	0.47	-1.8
5,743,506	+		QEN71_RS25780	0.47	-2.2
5,743,506	+		QEN71_RS25780	0.47	-1.1
5,743,506	+		QEN71_RS25780	0.47	-0.2
5,743,506	+		QEN71_RS25780	0.47	-0.7
5,743,506	+		QEN71_RS25780	0.47	+1.1
5,743,506	+		QEN71_RS25780	0.47	-0.1
5,743,506	+		QEN71_RS25780	0.47	-1.0
5,743,506	+		QEN71_RS25780	0.47	+4.7
5,743,506	+		QEN71_RS25780	0.47	-0.9
5,743,506	+		QEN71_RS25780	0.47	-0.8
5,743,506	+		QEN71_RS25780	0.47	-2.9
5,743,506	+		QEN71_RS25780	0.47	+0.1
5,743,506	+		QEN71_RS25780	0.47	-0.2
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