Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_04083

Experiment: monoculture; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 4
4,576,233	+		MIT1002_04080	0.23	-0.5
4,576,257	-		MIT1002_04080	0.29	-0.5
4,576,413	+		MIT1002_04080	0.70	-1.5
4,576,435	-		MIT1002_04080	0.76	+2.4
4,576,441	-		MIT1002_04080	0.78	+0.9
4,576,491	+				+1.0
4,576,545	-				+0.5
4,576,574	+				+1.3
4,576,618	+		MIT1002_04081	0.21	+0.3
4,576,619	-		MIT1002_04081	0.22	+1.6
4,576,620	+		MIT1002_04081	0.22	-1.3
4,576,620	-		MIT1002_04081	0.22	-0.8
4,576,629	+		MIT1002_04081	0.26	-0.3
4,576,637	-		MIT1002_04081	0.30	-0.2
4,576,662	-		MIT1002_04081	0.42	-0.9
4,576,675	+		MIT1002_04081	0.48	-1.6
4,576,725	-		MIT1002_04081	0.71	-0.5
4,576,725	-		MIT1002_04081	0.71	+0.3
4,576,951	+		MIT1002_04082	0.18	+1.4
4,576,957	+		MIT1002_04082	0.20	+0.6
4,576,984	+		MIT1002_04082	0.30	-0.4
4,577,008	-		MIT1002_04082	0.39	-0.6
4,577,068	+		MIT1002_04082	0.61	+1.7
4,577,068	-		MIT1002_04082	0.61	+1.1
4,577,070	+		MIT1002_04082	0.62	-1.9
4,577,075	+		MIT1002_04082	0.64	-0.4
4,577,087	+		MIT1002_04082	0.69	-0.9
4,577,088	+		MIT1002_04082	0.69	-0.2
4,577,150	+				-0.5
4,577,163	-				-0.7
4,577,183	-				+1.1
4,577,231	+				+0.9
4,577,303	+		MIT1002_04083	0.20	+0.4
4,577,357	+		MIT1002_04083	0.29	-0.8
4,577,357	+		MIT1002_04083	0.29	+0.7
4,577,365	-		MIT1002_04083	0.31	-1.7
4,577,396	+		MIT1002_04083	0.36	-1.1
4,577,450	-		MIT1002_04083	0.45	-1.6
4,577,570	-		MIT1002_04083	0.66	+0.4
4,577,630	-		MIT1002_04083	0.76	-1.1
4,577,646	+		MIT1002_04083	0.79	-1.8
4,577,667	+		MIT1002_04083	0.82	-0.4
4,577,717	+				-1.0
4,577,742	-				-0.1
4,577,750	-				-0.1
4,577,855	+				+0.4
4,577,878	-				+0.8
4,577,903	-				-1.1
4,577,919	+				+0.6
4,578,000	+		MIT1002_04084	0.18	-1.0
4,578,000	+		MIT1002_04084	0.18	+0.7
4,578,000	+		MIT1002_04084	0.18	-1.4
4,578,032	-		MIT1002_04084	0.21	-1.2
4,578,038	+		MIT1002_04084	0.22	+1.9
4,578,121	-		MIT1002_04084	0.31	+2.0
4,578,136	-		MIT1002_04084	0.33	+2.4
4,578,136	-		MIT1002_04084	0.33	+0.4
4,578,136	-		MIT1002_04084	0.33	+0.3
4,578,154	+		MIT1002_04084	0.35	+0.5
4,578,196	+		MIT1002_04084	0.40	+0.0
4,578,214	-		MIT1002_04084	0.42	-0.2
4,578,220	-		MIT1002_04084	0.43	+0.5
4,578,263	+		MIT1002_04084	0.48	-1.0
4,578,302	-		MIT1002_04084	0.52	-0.1
4,578,371	-		MIT1002_04084	0.60	+0.2
4,578,410	-		MIT1002_04084	0.65	-2.5
4,578,439	+		MIT1002_04084	0.68	-0.1
4,578,514	+		MIT1002_04084	0.77	-2.9
4,578,565	-		MIT1002_04084	0.83	-0.2
4,578,590	-		MIT1002_04084	0.86	-0.1
4,578,650	-				-1.7
4,578,720	-				+0.6